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Fitness for 5 genes in
Vibrio cholerae E7946 ATCC 55056
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
CSW01_13685 and CSW01_13690 are separated by 24 nucleotides
CSW01_13690 and CSW01_13695 are separated by 68 nucleotides
CSW01_13695 and CSW01_13700 are separated by 137 nucleotides
CSW01_13700 and CSW01_13705 are separated by 244 nucleotides
CSW01_13685: CSW01_13685 - xanthine permease XanP, at 2,917,020 to 2,918,462
_13685
CSW01_13690: CSW01_13690 - two-component system sensor histidine kinase EnvZ, at 2,918,487 to 2,919,803
_13690
CSW01_13695: CSW01_13695 - two-component system response regulator OmpR, at 2,919,872 to 2,920,594
_13695
CSW01_13700: CSW01_13700 - transcription elongation factor GreB, at 2,920,732 to 2,921,217
_13700
CSW01_13705: CSW01_13705 - RNA-binding transcriptional accessory protein, at 2,921,462 to 2,923,783
_13705
Group
Condition
CSW01
_13685
CSW01
_13690
CSW01
_13695
CSW01
_13700
CSW01
_13705
lb_anaerobic
LB_Anaerobic_18HR_ZN20A
-0.1
-0.2
+0.1
+0.1
-0.1
lb_0.5%bileacids_aerobic
LB_0.5%bileacids_aerobic_18HR_ZN19B
-0.0
-0.2
+0.0
+0.2
-0.1
lb_0.5%bileacids_aerobic
LB_0.5%bileacids_aerobic_18HR_ZN19A
-0.0
-0.1
+0.0
+0.2
-0.1
lb_anaerobic
LB_Anaerobic_180MIN_ZN16B
+0.1
-0.1
+0.1
-0.1
-0.1
lb_0.5%bileacids_anaerobic
LB_0.5%bileacids_Anaerobic_18HR_ZN21A
+0.1
-0.1
+0.1
+0.1
-0.1
lb_aerobic
LB_Aerobic_180MIN_ZN14B
-0.1
-0.1
+0.1
+0.2
-0.0
lb_aerobic
LB_Aerobic_120MIN_ZN10B
+0.1
-0.1
-0.1
+0.1
+0.0
phage
ICP1_phage_0.23_MOI_rep2
-0.1
+0.0
+0.5
-0.2
-0.2
lb_0.5%bileacids_anaerobic
LB_0.5%bileacids_Anaerobic_60MIN_ZN5A
+0.1
-0.1
-0.1
+0.2
+0.0
phage
ICP1_phage_23.5_MOI_rep1
-0.2
+0.2
+0.1
+0.0
-0.0
lb_aerobic
LB_Aerobic_18HR_ZN18A
-0.1
+0.0
+0.1
+0.2
-0.0
lb_aerobic
LB_Aerobic_60MIN_ZN2B
+0.2
-0.0
+0.2
+0.0
-0.0
phage
ICP3_phage_41.1_MOI_rep1
+0.0
+0.2
-0.1
+0.4
-0.2
phage
ICP3_phage_4.1_MOI_rep1
-0.0
+0.2
+0.2
+0.1
-0.1
lb_0.5%bileacids_aerobic
LB_0.5%bileacids_aerobic_180MIN_ZN15A
+0.1
-0.0
+0.1
+0.1
+0.0
lb_0.5%bileacids_aerobic
LB_0.5%bileacids_aerobic_180MIN_ZN15B
+0.1
-0.0
+0.0
+0.3
+0.1
phage
ICP3_phage_411_MOI_rep2
+0.0
+0.0
+0.4
+0.2
-0.2
phage
ICP1_phage_23.5_MOI_rep2
+0.2
+0.1
+0.3
+0.0
-0.1
phage
ICP1_phage_2.3_MOI_rep2
+0.1
+0.1
+0.2
+0.2
-0.0
phage
ICP3_phage_0.41_MOI_rep1
-0.1
+0.4
+0.2
-0.0
+0.1
lb_anaerobic
LB_Anaerobic_60MIN_ZN4B
+0.1
+0.0
+0.2
+0.3
-0.0
phage
ICP3_phage_41.1_MOI_rep2
+0.2
+0.3
+0.5
-0.2
-0.1
phage
ICP3_phage_4.1_MOI_rep2
+0.1
+0.2
+0.3
-0.0
+0.1
lb_aerobic_phage
LB_Aerobic_PHAGE INFX20MPI_ZN6A
+0.1
+0.0
+0.2
+0.2
+0.1
phage
ICP1_phage_235.3_MOI_rep2
-0.0
+0.3
+0.6
-0.1
-0.0
phage
ICP1_phage_235.3_MOI_rep1
-0.0
+0.2
+0.8
+0.0
-0.0
phage
ICP3_phage_411_MOI_rep1
+0.2
+0.1
+0.3
+0.3
+0.1
phage
ICP1_phage_0.23_MOI_rep1
+0.2
+0.2
+0.4
+0.3
-0.0
phage
ICP1_phage_2.3_MOI_rep1
+0.2
+0.1
+0.5
+0.2
+0.1
phage
ICP3_phage_0.41_MOI_rep2
+0.0
+0.2
+0.5
+0.7
+0.1
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