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Fitness for 5 genes in
Vibrio cholerae E7946 ATCC 55056
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
CSW01_13495 and CSW01_13500 are separated by 86 nucleotides
CSW01_13500 and CSW01_13505 are separated by 74 nucleotides
CSW01_13505 and CSW01_13510 are separated by 103 nucleotides
CSW01_13510 and CSW01_13515 are separated by 65 nucleotides
CSW01_13495: CSW01_13495 - MATE family efflux transporter, at 2,869,566 to 2,870,948
_13495
CSW01_13500: CSW01_13500 - ribonuclease E activity regulator RraA, at 2,871,035 to 2,871,550
_13500
CSW01_13505: CSW01_13505 - 1,4-dihydroxy-2-naphthoate polyprenyltransferase, at 2,871,625 to 2,872,542
_13505
CSW01_13510: CSW01_13510 - HslU--HslV peptidase ATPase subunit, at 2,872,646 to 2,873,977
_13510
CSW01_13515: CSW01_13515 - HslU--HslV peptidase proteolytic subunit, at 2,874,043 to 2,874,600
_13515
Group
Condition
CSW01
_13495
CSW01
_13500
CSW01
_13505
CSW01
_13510
CSW01
_13515
lb_anaerobic
LB_Anaerobic_18HR_ZN20B
-0.1
-0.1
-0.8
-0.2
-0.2
lb_0.5%bileacids_anaerobic
LB_0.5%bileacids_Anaerobic_18HR_ZN21A
-0.1
-0.4
-0.9
-0.1
+0.2
lb_anaerobic
LB_Anaerobic_120MIN_ZN12B
-0.1
-0.0
-0.3
-0.2
-0.3
phage
ICP1_phage_23.5_MOI_rep1
+0.1
+0.0
-0.2
-0.3
-0.5
lb_aerobic
LB_Aerobic_180MIN_ZN14A
-0.1
-0.1
-0.3
-0.2
-0.2
lb_0.5%bileacids_anaerobic
LB_0.5%bileacids_Anaerobic_180MIN_ZN17B
-0.0
-0.1
-0.7
-0.2
+0.2
phage
ICP3_phage_411_MOI_rep2
+0.2
+0.1
-0.1
-0.2
-0.8
lb_0.5%bileacids_aerobic
LB_0.5%bileacids_aerobic_18HR_ZN19B
-0.1
-0.4
-0.1
-0.1
-0.1
lb_aerobic
LB_Aerobic_18HR_ZN18A
+0.0
-0.1
-0.7
+0.0
+0.1
lb_aerobic_phage
LB_Aerobic_PHAGE INFX20MPI_ZN6A
-0.0
-0.2
-0.3
-0.0
-0.1
lb_0.5%bileacids_anaerobic
LB_0.5%bileacids_Anaerobic_60MIN_ZN5B
-0.0
-0.5
-0.3
+0.1
+0.1
phage
NoPhageControl
-0.1
+0.3
+0.1
+0.1
-0.8
phage
NoPhageControl
-0.1
+0.3
-0.0
-0.1
-0.5
phage
ICP3_phage_0.41_MOI_rep1
+0.1
-0.1
-0.1
-0.2
-0.1
lb_0.5%bileacids_aerobic
LB_0.5%bileacids_aerobic_120MIN_ZN11A
-0.1
-0.3
+0.2
+0.0
-0.1
phage
ICP1_phage_2.3_MOI_rep1
+0.3
+0.4
-0.2
+0.1
-0.9
phage
ICP3_phage_41.1_MOI_rep2
+0.3
-0.5
+0.1
+0.1
-0.2
phage
ICP1_phage_23.5_MOI_rep2
+0.3
+0.5
-0.0
-0.2
-0.7
lb_aerobic
LB_Aerobic_180MIN_ZN14B
-0.2
-0.2
+0.1
-0.1
+0.2
phage
ICP3_phage_41.1_MOI_rep1
+0.4
-0.3
+0.1
+0.2
-0.5
phage
ICP1_phage_2.3_MOI_rep2
+0.3
+0.0
+0.1
-0.2
-0.2
phage
ICP3_phage_4.1_MOI_rep1
+0.2
+0.2
-0.0
+0.1
-0.5
lb_0.5%bileacids_aerobic
LB_0.5%bileacids_aerobic_180MIN_ZN15B
-0.0
-0.3
+0.3
-0.1
+0.2
phage
ICP1_phage_235.3_MOI_rep1
+0.1
+0.3
-0.0
+0.3
-0.5
phage
ICP1_phage_0.23_MOI_rep1
+0.2
+0.6
-0.2
+0.1
-0.5
phage
ICP3_phage_411_MOI_rep1
+0.3
+0.6
-0.3
+0.1
-0.5
phage
ICP1_phage_235.3_MOI_rep2
+0.1
+0.6
+0.1
+0.2
-0.8
phage
ICP1_phage_0.23_MOI_rep2
+0.1
+0.7
-0.0
-0.3
-0.1
phage
ICP3_phage_4.1_MOI_rep2
+0.2
+0.4
+0.0
-0.1
-0.2
phage
ICP3_phage_0.41_MOI_rep2
+0.5
+0.7
-0.0
-0.0
+0.0
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