Fitness for 5 genes in Vibrio cholerae E7946 ATCC 55056

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500 ntCSW01_13485 and CSW01_13490 are separated by 243 nucleotidesCSW01_13490 and CSW01_13495 are separated by 117 nucleotidesCSW01_13495 and CSW01_13500 are separated by 86 nucleotidesCSW01_13500 and CSW01_13505 are separated by 74 nucleotides CSW01_13485: CSW01_13485 - 5-carboxymethyl-2-hydroxymuconate isomerase, at 2,868,081 to 2,868,431 _13485 CSW01_13490: CSW01_13490 - triose-phosphate isomerase, at 2,868,675 to 2,869,448 _13490 CSW01_13495: CSW01_13495 - MATE family efflux transporter, at 2,869,566 to 2,870,948 _13495 CSW01_13500: CSW01_13500 - ribonuclease E activity regulator RraA, at 2,871,035 to 2,871,550 _13500 CSW01_13505: CSW01_13505 - 1,4-dihydroxy-2-naphthoate polyprenyltransferase, at 2,871,625 to 2,872,542 _13505
Group Condition CSW01_13485 CSW01_13490 CSW01_13495 CSW01_13500 CSW01_13505
lb_0.5%bileacids_anaerobic LB_0.5%bileacids_Anaerobic_18HR_ZN21A -0.4 N.D. -0.1 -0.4 -0.9
lb_aerobic LB_Aerobic_18HR_ZN18A -0.3 N.D. +0.0 -0.1 -0.7
lb_0.5%bileacids_anaerobic LB_0.5%bileacids_Anaerobic_60MIN_ZN5B -0.1 N.D. -0.0 -0.5 -0.3
lb_anaerobic LB_Anaerobic_18HR_ZN20B +0.1 N.D. -0.1 -0.1 -0.8
lb_0.5%bileacids_anaerobic LB_0.5%bileacids_Anaerobic_180MIN_ZN17B -0.1 N.D. -0.0 -0.1 -0.7
lb_0.5%bileacids_anaerobic LB_0.5%bileacids_Anaerobic_120MIN_ZN13A -0.4 N.D. -0.1 -0.2 -0.2
lb_aerobic LB_Aerobic_180MIN_ZN14A -0.1 N.D. -0.1 -0.1 -0.3
lb_0.5%bileacids_aerobic LB_0.5%bileacids_aerobic_18HR_ZN19B -0.0 N.D. -0.1 -0.4 -0.1
lb_0.5%bileacids_anaerobic LB_0.5%bileacids_Anaerobic_120MIN_ZN13B -0.1 N.D. -0.1 -0.0 -0.3
lb_aerobic_phage LB_Aerobic_PHAGE INFX20MPI_ZN6A -0.1 N.D. -0.0 -0.2 -0.3
lb_0.5%bileacids_anaerobic LB_0.5%bileacids_Anaerobic_180MIN_ZN17A -0.2 N.D. -0.1 -0.1 -0.1
lb_anaerobic LB_Anaerobic_120MIN_ZN12B -0.1 N.D. -0.1 -0.0 -0.3
lb_anaerobic LB_Anaerobic_180MIN_ZN16B -0.1 N.D. -0.0 -0.3 -0.1
lb_0.5%bileacids_aerobic LB_0.5%bileacids_aerobic_180MIN_ZN15B -0.4 N.D. -0.0 -0.3 +0.3
lb_aerobic LB_Aerobic_180MIN_ZN14B -0.1 N.D. -0.2 -0.2 +0.1
lb_0.5%bileacids_aerobic LB_0.5%bileacids_aerobic_120MIN_ZN11A -0.0 N.D. -0.1 -0.3 +0.2
phage ICP3_phage_41.1_MOI_rep2 +0.1 N.D. +0.3 -0.5 +0.1
phage ICP3_phage_41.1_MOI_rep1 -0.1 N.D. +0.4 -0.3 +0.1
phage ICP1_phage_235.3_MOI_rep1 -0.1 N.D. +0.1 +0.3 -0.0
phage NoPhageControl +0.1 N.D. -0.1 +0.3 +0.1
phage ICP3_phage_0.41_MOI_rep1 +0.4 N.D. +0.1 -0.1 -0.1
phage ICP3_phage_4.1_MOI_rep2 -0.2 N.D. +0.2 +0.4 +0.0
lb_0.5%bileacids_anaerobic LB_0.5%bileacids_Anaerobic_60MIN_ZN5A +0.2 N.D. +0.0 +0.4 -0.1
phage ICP1_phage_0.23_MOI_rep2 -0.1 N.D. +0.1 +0.7 -0.0
phage ICP1_phage_0.23_MOI_rep1 +0.2 N.D. +0.2 +0.6 -0.2
phage ICP3_phage_0.41_MOI_rep2 -0.4 N.D. +0.5 +0.7 -0.0
phage ICP1_phage_23.5_MOI_rep2 +0.1 N.D. +0.3 +0.5 -0.0
phage ICP1_phage_2.3_MOI_rep1 +0.3 N.D. +0.3 +0.4 -0.2
phage ICP3_phage_411_MOI_rep1 +0.4 N.D. +0.3 +0.6 -0.3
phage ICP1_phage_235.3_MOI_rep2 +0.5 N.D. +0.1 +0.6 +0.1
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CSW01_13485
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