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Fitness for 5 genes in
Vibrio cholerae E7946 ATCC 55056
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
CSW01_13470 and CSW01_13475 are separated by 138 nucleotides
CSW01_13475 and CSW01_13480 are separated by 126 nucleotides
CSW01_13480 and CSW01_13485 are separated by 19 nucleotides
CSW01_13485 and CSW01_13490 are separated by 243 nucleotides
CSW01_13470: CSW01_13470 - transcriptional regulator, at 2,866,379 to 2,866,996
_13470
CSW01_13475: CSW01_13475 - DUF3135 domain-containing protein, at 2,867,135 to 2,867,494
_13475
CSW01_13480: CSW01_13480 - DUF805 domain-containing protein, at 2,867,621 to 2,868,061
_13480
CSW01_13485: CSW01_13485 - 5-carboxymethyl-2-hydroxymuconate isomerase, at 2,868,081 to 2,868,431
_13485
CSW01_13490: CSW01_13490 - triose-phosphate isomerase, at 2,868,675 to 2,869,448
_13490
Group
Condition
CSW01
_13470
CSW01
_13475
CSW01
_13480
CSW01
_13485
CSW01
_13490
phage
ICP1_phage_0.23_MOI_rep2
+0.7
-0.4
-0.8
-0.1
N.D.
lb_aerobic
LB_Aerobic_18HR_ZN18A
-0.2
+0.0
-0.0
-0.3
N.D.
lb_0.5%bileacids_anaerobic
LB_0.5%bileacids_Anaerobic_18HR_ZN21A
-0.2
+0.0
+0.1
-0.4
N.D.
lb_aerobic
LB_Aerobic_180MIN_ZN14B
-0.2
-0.2
-0.1
-0.1
N.D.
lb_0.5%bileacids_anaerobic
LB_0.5%bileacids_Anaerobic_120MIN_ZN13A
-0.1
+0.2
-0.2
-0.4
N.D.
phage
ICP3_phage_0.41_MOI_rep2
+0.4
+0.1
-0.5
-0.4
N.D.
lb_aerobic
LB_Aerobic_180MIN_ZN14A
-0.3
+0.1
-0.1
-0.1
N.D.
lb_0.5%bileacids_aerobic
LB_0.5%bileacids_aerobic_180MIN_ZN15A
-0.1
-0.0
+0.2
-0.3
N.D.
lb_0.5%bileacids_aerobic
LB_0.5%bileacids_aerobic_180MIN_ZN15B
-0.0
-0.0
+0.2
-0.4
N.D.
lb_0.5%bileacids_anaerobic
LB_0.5%bileacids_Anaerobic_120MIN_ZN13B
-0.2
-0.1
+0.2
-0.1
N.D.
lb_aerobic
LB_Aerobic_18HR_ZN18B
-0.2
+0.0
+0.3
-0.3
N.D.
lb_0.5%bileacids_anaerobic
LB_0.5%bileacids_Anaerobic_180MIN_ZN17A
-0.2
+0.0
+0.1
-0.2
N.D.
lb_0.5%bileacids_aerobic
LB_0.5%bileacids_aerobic_120MIN_ZN11B
-0.2
+0.0
+0.2
-0.2
N.D.
lb_anaerobic
LB_Anaerobic_120MIN_ZN12B
-0.3
+0.2
+0.1
-0.1
N.D.
lb_aerobic
LB_Aerobic_60MIN_ZN2B
+0.1
+0.1
-0.4
-0.0
N.D.
lb_0.5%bileacids_aerobic
LB_0.5%bileacids_aerobic_18HR_ZN19A
-0.2
+0.2
+0.1
-0.2
N.D.
phage
ICP3_phage_41.1_MOI_rep1
+0.3
+0.1
-0.3
-0.1
N.D.
phage
ICP3_phage_411_MOI_rep2
+0.3
-0.2
-0.1
+0.1
N.D.
phage
ICP1_phage_0.23_MOI_rep1
+0.3
-0.2
-0.1
+0.2
N.D.
phage
ICP1_phage_235.3_MOI_rep1
+0.3
+0.1
+0.1
-0.1
N.D.
phage
ICP1_phage_2.3_MOI_rep1
+0.7
-0.0
-0.2
+0.3
N.D.
phage
ICP3_phage_4.1_MOI_rep2
+0.4
+0.3
+0.3
-0.2
N.D.
phage
ICP1_phage_23.5_MOI_rep1
+0.7
+0.1
+0.1
+0.0
N.D.
phage
ICP1_phage_235.3_MOI_rep2
+0.5
+0.1
-0.1
+0.5
N.D.
phage
ICP1_phage_23.5_MOI_rep2
+0.3
+0.1
+0.4
+0.1
N.D.
phage
ICP3_phage_0.41_MOI_rep1
+0.6
-0.1
+0.3
+0.4
N.D.
phage
ICP1_phage_2.3_MOI_rep2
+0.4
+0.6
+0.2
+0.1
N.D.
phage
ICP3_phage_4.1_MOI_rep1
+0.7
-0.1
+0.7
+0.0
N.D.
phage
ICP3_phage_41.1_MOI_rep2
+0.5
+0.3
+0.5
+0.1
N.D.
phage
ICP3_phage_411_MOI_rep1
+0.7
+0.2
+0.3
+0.4
N.D.
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