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Fitness for 5 genes in
Vibrio cholerae E7946 ATCC 55056
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
CSW01_13430 and CSW01_13435 are separated by 2 nucleotides
CSW01_13435 and CSW01_13440 overlap by 20 nucleotides
CSW01_13440 and CSW01_13445 are separated by 113 nucleotides
CSW01_13445 and CSW01_13450 are separated by 32 nucleotides
CSW01_13430: CSW01_13430 - succinate dehydrogenase/fumarate reductase iron-sulfur subunit, at 2,859,981 to 2,860,739
_13430
CSW01_13435: CSW01_13435 - fumarate reductase subunit C, at 2,860,742 to 2,861,125
_13435
CSW01_13440: CSW01_13440 - fumarate reductase subunit D, at 2,861,106 to 2,861,498
_13440
CSW01_13445: CSW01_13445 - elongation factor P, at 2,861,612 to 2,862,178
_13445
CSW01_13450: CSW01_13450 - EF-P beta-lysylation protein EpmB, at 2,862,211 to 2,863,233
_13450
Group
Condition
CSW01
_13430
CSW01
_13435
CSW01
_13440
CSW01
_13445
CSW01
_13450
phage
ICP3_phage_41.1_MOI_rep2
+0.2
+0.7
+0.3
-5.1
-3.8
phage
ICP3_phage_411_MOI_rep1
+0.1
-0.2
-0.1
-3.8
-2.7
phage
ICP1_phage_0.23_MOI_rep1
+0.1
-0.0
+0.2
-2.4
-4.3
phage
ICP1_phage_23.5_MOI_rep1
-0.1
+0.2
+0.2
-2.6
-2.7
phage
ICP1_phage_23.5_MOI_rep2
+0.0
-0.0
-0.1
-2.3
-1.7
phage
ICP3_phage_0.41_MOI_rep1
+0.2
-0.3
-0.2
-1.3
-2.2
phage
ICP3_phage_4.1_MOI_rep2
+0.2
+0.4
-0.3
-2.1
-1.8
phage
ICP1_phage_2.3_MOI_rep2
-0.1
-0.3
+0.0
-1.4
-1.8
phage
ICP1_phage_0.23_MOI_rep2
+0.1
-0.2
+0.2
-2.0
-1.7
phage
ICP3_phage_411_MOI_rep2
+0.0
-0.1
-0.0
-1.0
-2.4
phage
ICP3_phage_41.1_MOI_rep1
+0.2
-0.1
+0.0
-1.3
-2.2
phage
NoPhageControl
+0.0
+0.4
+0.1
-2.1
-1.6
phage
ICP1_phage_235.3_MOI_rep2
-0.1
-0.3
-0.1
-1.4
-1.0
phage
ICP1_phage_2.3_MOI_rep1
-0.1
+0.2
+0.5
-2.5
-1.1
lb_0.5%bileacids_aerobic
LB_0.5%bileacids_aerobic_18HR_ZN19A
-0.2
-0.1
-0.1
-0.8
-1.4
phage
ICP1_phage_235.3_MOI_rep1
+0.2
-0.2
-0.2
-0.8
-1.4
lb_aerobic
LB_Aerobic_18HR_ZN18A
-0.8
-0.5
-1.0
-0.3
+0.4
phage
ICP3_phage_0.41_MOI_rep2
+0.1
+0.3
-0.1
-1.4
-1.2
phage
NoPhageControl
+0.1
+0.2
-0.0
-1.4
-0.9
lb_0.5%bileacids_anaerobic
LB_0.5%bileacids_Anaerobic_180MIN_ZN17B
-0.8
-0.4
-0.7
+0.6
+0.1
lb_0.5%bileacids_aerobic
LB_0.5%bileacids_aerobic_18HR_ZN19B
-0.1
-0.2
-0.3
+0.6
-1.1
lb_0.5%bileacids_anaerobic
LB_0.5%bileacids_Anaerobic_18HR_ZN21A
-0.4
-0.6
-0.5
+0.5
+0.3
lb_aerobic
LB_Aerobic_18HR_ZN18B
-0.1
-0.1
+0.0
+0.8
-1.1
lb_aerobic
LB_Aerobic_180MIN_ZN14A
-0.3
-0.5
-0.3
+1.3
+0.3
lb_0.5%bileacids_aerobic
LB_0.5%bileacids_aerobic_120MIN_ZN11A
+0.0
-0.1
+0.0
+1.5
-0.8
lb_0.5%bileacids_anaerobic
LB_0.5%bileacids_Anaerobic_120MIN_ZN13B
-0.3
-0.1
-0.5
+0.8
+0.6
lb_aerobic_phage
LB_Aerobic_PHAGE INFX20MPI_ZN6A
-0.3
-0.3
-0.3
+1.2
+0.4
lb_0.5%bileacids_aerobic
LB_0.5%bileacids_aerobic_120MIN_ZN11B
-0.0
-0.0
-0.2
+1.9
+0.4
lb_anaerobic
LB_Anaerobic_120MIN_ZN12A
+0.2
+0.0
+0.3
+1.4
+0.6
lb_0.5%bileacids_aerobic
LB_0.5%bileacids_aerobic_180MIN_ZN15B
+0.1
+0.1
+0.2
+1.7
+0.6
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