Fitness for 5 genes in Vibrio cholerae E7946 ATCC 55056

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500 ntCSW01_13305 and CSW01_13310 are separated by 186 nucleotidesCSW01_13310 and CSW01_13315 are separated by 4 nucleotidesCSW01_13315 and CSW01_13320 overlap by 11 nucleotidesCSW01_13320 and CSW01_13325 overlap by 17 nucleotides CSW01_13305: CSW01_13305 - shikimate kinase, at 2,831,879 to 2,832,403 _13305 CSW01_13310: CSW01_13310 - type IV pilus secretin PilQ, at 2,832,590 to 2,834,326 _13310 CSW01_13315: CSW01_13315 - fimbrial protein, at 2,834,331 to 2,834,849 _13315 CSW01_13320: CSW01_13320 - fimbrial protein, at 2,834,839 to 2,835,438 _13320 CSW01_13325: CSW01_13325 - pilus assembly protein PilN, at 2,835,422 to 2,836,012 _13325
Group Condition CSW01_13305 CSW01_13310 CSW01_13315 CSW01_13320 CSW01_13325
phage ICP3_phage_0.41_MOI_rep2 -4.3 -0.0 -0.2 +0.2 -0.0
phage ICP3_phage_41.1_MOI_rep2 -4.1 +0.1 -0.3 -0.0 +0.0
phage ICP1_phage_23.5_MOI_rep2 -4.2 +0.0 -0.1 +0.2 +0.0
phage ICP1_phage_2.3_MOI_rep2 -4.3 -0.1 +0.3 -0.0 +0.1
phage ICP1_phage_0.23_MOI_rep1 -4.1 -0.0 -0.1 +0.2 +0.1
phage ICP1_phage_235.3_MOI_rep2 -4.2 +0.3 -0.2 -0.1 +0.4
phage ICP1_phage_2.3_MOI_rep1 -4.1 +0.1 +0.3 -0.1 +0.3
phage ICP1_phage_23.5_MOI_rep1 -3.3 -0.0 +0.1 +0.1 -0.0
lb_anaerobic LB_Anaerobic_18HR_ZN20B -2.7 -0.1 -0.2 -0.0 -0.1
lb_aerobic_phage LB_Aerobic_PHAGE INFX20MPI_ZN6A -2.5 +0.0 -0.1 +0.1 -0.2
phage ICP3_phage_41.1_MOI_rep1 -2.3 -0.1 -0.4 +0.0 -0.0
phage ICP3_phage_0.41_MOI_rep1 -2.0 +0.0 -0.4 -0.0 -0.2
phage ICP3_phage_411_MOI_rep1 -3.1 +0.2 +0.1 -0.0 +0.3
lb_aerobic LB_Aerobic_60MIN_ZN2B -2.5 +0.1 -0.0 +0.0 -0.1
lb_0.5%bileacids_anaerobic LB_0.5%bileacids_Anaerobic_120MIN_ZN13A -2.1 -0.0 -0.2 +0.0 -0.1
phage NoPhageControl -2.0 +0.0 -0.1 +0.0 -0.2
lb_0.5%bileacids_aerobic LB_0.5%bileacids_aerobic_18HR_ZN19B -1.7 -0.1 -0.3 +0.1 -0.2
lb_0.5%bileacids_anaerobic LB_0.5%bileacids_Anaerobic_180MIN_ZN17A -1.8 -0.1 -0.1 -0.1 -0.2
lb_aerobic LB_Aerobic_180MIN_ZN14A -2.0 +0.0 -0.1 +0.1 -0.2
lb_0.5%bileacids_anaerobic LB_0.5%bileacids_Anaerobic_120MIN_ZN13B -1.9 +0.0 -0.1 +0.1 -0.2
phage ICP3_phage_4.1_MOI_rep1 -2.2 +0.1 +0.0 -0.1 +0.1
lb_0.5%bileacids_aerobic LB_0.5%bileacids_aerobic_120MIN_ZN11B -1.8 -0.1 -0.1 +0.0 -0.1
lb_aerobic LB_Aerobic_120MIN_ZN10B -1.8 -0.1 -0.1 +0.1 -0.1
lb_0.5%bileacids_aerobic LB_0.5%bileacids_aerobic_18HR_ZN19A -1.5 -0.0 -0.0 -0.1 -0.3
lb_anaerobic LB_Anaerobic_180MIN_ZN16B -1.8 -0.0 -0.1 +0.1 -0.1
lb_anaerobic LB_Anaerobic_18HR_ZN20A -1.4 -0.0 -0.3 +0.1 -0.1
lb_0.5%bileacids_anaerobic LB_0.5%bileacids_Anaerobic_180MIN_ZN17B -1.8 -0.0 -0.1 +0.1 -0.0
phage ICP1_phage_0.23_MOI_rep2 -1.7 -0.1 +0.1 +0.1 -0.1
lb_anaerobic LB_Anaerobic_120MIN_ZN12A -1.7 +0.2 -0.1 -0.1 +0.0
lb_anaerobic LB_Anaerobic_60MIN_ZN4B -1.6 +0.0 -0.3 +0.1 +0.1
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CSW01_13305
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CSW01_13325
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