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Fitness for 5 genes in
Vibrio cholerae E7946 ATCC 55056
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
CSW01_13295 and CSW01_13300 are separated by 54 nucleotides
CSW01_13300 and CSW01_13305 are separated by 12 nucleotides
CSW01_13305 and CSW01_13310 are separated by 186 nucleotides
CSW01_13310 and CSW01_13315 are separated by 4 nucleotides
CSW01_13295: CSW01_13295 - cell division protein DamX, at 2,829,236 to 2,830,711
_13295
CSW01_13300: CSW01_13300 - 3-dehydroquinate synthase, at 2,830,766 to 2,831,866
_13300
CSW01_13305: CSW01_13305 - shikimate kinase, at 2,831,879 to 2,832,403
_13305
CSW01_13310: CSW01_13310 - type IV pilus secretin PilQ, at 2,832,590 to 2,834,326
_13310
CSW01_13315: CSW01_13315 - fimbrial protein, at 2,834,331 to 2,834,849
_13315
Group
Condition
CSW01
_13295
CSW01
_13300
CSW01
_13305
CSW01
_13310
CSW01
_13315
phage
ICP3_phage_0.41_MOI_rep2
-0.0
-0.7
-4.3
-0.0
-0.2
phage
ICP3_phage_41.1_MOI_rep2
+0.1
-0.9
-4.1
+0.1
-0.3
phage
ICP1_phage_0.23_MOI_rep1
-0.2
-0.4
-4.1
-0.0
-0.1
phage
ICP1_phage_23.5_MOI_rep2
+0.2
-0.4
-4.2
+0.0
-0.1
phage
ICP1_phage_235.3_MOI_rep2
+0.0
-0.1
-4.2
+0.3
-0.2
phage
ICP1_phage_2.3_MOI_rep2
-0.2
+0.2
-4.3
-0.1
+0.3
phage
ICP1_phage_23.5_MOI_rep1
-0.1
-0.3
-3.3
-0.0
+0.1
lb_anaerobic
LB_Anaerobic_18HR_ZN20B
+0.2
-0.8
-2.7
-0.1
-0.2
phage
ICP1_phage_2.3_MOI_rep1
-0.1
+0.3
-4.1
+0.1
+0.3
lb_aerobic_phage
LB_Aerobic_PHAGE INFX20MPI_ZN6A
+0.5
-1.2
-2.5
+0.0
-0.1
phage
ICP3_phage_41.1_MOI_rep1
+0.1
-0.6
-2.3
-0.1
-0.4
phage
ICP3_phage_411_MOI_rep1
-0.1
-0.3
-3.1
+0.2
+0.1
lb_0.5%bileacids_aerobic
LB_0.5%bileacids_aerobic_18HR_ZN19B
+0.3
-1.3
-1.7
-0.1
-0.3
phage
ICP3_phage_0.41_MOI_rep1
+0.1
-0.3
-2.0
+0.0
-0.4
lb_0.5%bileacids_anaerobic
LB_0.5%bileacids_Anaerobic_120MIN_ZN13A
+0.5
-0.7
-2.1
-0.0
-0.2
lb_0.5%bileacids_aerobic
LB_0.5%bileacids_aerobic_180MIN_ZN15B
+0.1
-0.9
-1.5
+0.0
-0.2
phage
ICP3_phage_4.1_MOI_rep1
-0.2
-0.1
-2.2
+0.1
+0.0
lb_anaerobic
LB_Anaerobic_180MIN_ZN16B
+0.5
-1.0
-1.8
-0.0
-0.1
lb_aerobic
LB_Aerobic_180MIN_ZN14A
+0.6
-0.9
-2.0
+0.0
-0.1
lb_aerobic
LB_Aerobic_60MIN_ZN2B
+0.4
-0.3
-2.5
+0.1
-0.0
lb_0.5%bileacids_anaerobic
LB_0.5%bileacids_Anaerobic_180MIN_ZN17A
+0.5
-0.9
-1.8
-0.1
-0.1
lb_0.5%bileacids_aerobic
LB_0.5%bileacids_aerobic_120MIN_ZN11B
+0.2
-0.5
-1.8
-0.1
-0.1
lb_anaerobic
LB_Anaerobic_18HR_ZN20A
+0.3
-0.8
-1.4
-0.0
-0.3
lb_0.5%bileacids_aerobic
LB_0.5%bileacids_aerobic_18HR_ZN19A
+0.3
-0.9
-1.5
-0.0
-0.0
lb_aerobic
LB_Aerobic_120MIN_ZN10B
+0.4
-0.7
-1.8
-0.1
-0.1
lb_anaerobic
LB_Anaerobic_60MIN_ZN4B
+0.4
-0.6
-1.6
+0.0
-0.3
lb_0.5%bileacids_anaerobic
LB_0.5%bileacids_Anaerobic_120MIN_ZN13B
+0.6
-0.5
-1.9
+0.0
-0.1
lb_anaerobic
LB_Anaerobic_120MIN_ZN12A
+0.2
-0.4
-1.7
+0.2
-0.1
lb_0.5%bileacids_anaerobic
LB_0.5%bileacids_Anaerobic_180MIN_ZN17B
+0.8
-0.7
-1.8
-0.0
-0.1
lb_anaerobic
LB_Anaerobic_120MIN_ZN12B
+0.6
-0.9
-0.9
-0.1
-0.1
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