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Fitness for 5 genes in
Vibrio cholerae E7946 ATCC 55056
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
CSW01_12980 and CSW01_12985 are separated by 225 nucleotides
CSW01_12985 and CSW01_12990 are separated by 2 nucleotides
CSW01_12990 and CSW01_12995 overlap by 51 nucleotides
CSW01_12995 and CSW01_13000 are separated by 219 nucleotides
CSW01_12980: CSW01_12980 - ATP-dependent RNA helicase DbpA, at 2,777,540 to 2,778,922
_12980
CSW01_12985: CSW01_12985 - ElaA protein, at 2,779,148 to 2,779,597
_12985
CSW01_12990: CSW01_12990 - EamA family transporter, at 2,779,600 to 2,780,409
_12990
CSW01_12995: CSW01_12995 - lysine transporter LysM, at 2,780,359 to 2,780,931
_12995
CSW01_13000: CSW01_13000 - peptidylprolyl isomerase, at 2,781,151 to 2,781,771
_13000
Group
Condition
CSW01
_12980
CSW01
_12985
CSW01
_12990
CSW01
_12995
CSW01
_13000
phage
ICP3_phage_411_MOI_rep2
-0.0
-0.3
-0.3
-0.6
-0.4
phage
ICP1_phage_23.5_MOI_rep2
+0.0
-0.3
-0.2
-0.4
-0.2
phage
ICP3_phage_411_MOI_rep1
+0.0
-0.2
-0.2
-0.2
-0.4
phage
ICP3_phage_41.1_MOI_rep1
-0.1
+0.0
-0.3
-0.0
-0.4
phage
ICP1_phage_235.3_MOI_rep1
-0.1
+0.0
+0.0
-0.1
-0.6
lb_0.5%bileacids_anaerobic
LB_0.5%bileacids_Anaerobic_60MIN_ZN5B
-0.1
+0.0
-0.1
-0.4
-0.1
phage
ICP1_phage_2.3_MOI_rep1
+0.1
-0.1
-0.3
-0.4
+0.1
phage
ICP3_phage_4.1_MOI_rep1
-0.0
+0.0
-0.0
-0.3
-0.2
phage
ICP3_phage_4.1_MOI_rep2
-0.2
-0.1
+0.0
+0.1
-0.3
phage
ICP1_phage_2.3_MOI_rep2
+0.1
-0.4
-0.4
+0.1
+0.3
phage
ICP3_phage_0.41_MOI_rep2
+0.1
-0.1
-0.2
-0.3
+0.1
lb_0.5%bileacids_aerobic
LB_0.5%bileacids_aerobic_120MIN_ZN11B
+0.0
-0.0
-0.1
-0.2
-0.1
lb_aerobic_phage
LB_Aerobic_PHAGE INFX20MPI_ZN6A
-0.1
-0.0
-0.1
-0.2
+0.1
lb_0.5%bileacids_aerobic
LB_0.5%bileacids_aerobic_18HR_ZN19B
+0.0
+0.0
-0.1
-0.2
-0.0
phage
NoPhageControl
+0.1
+0.0
-0.0
-0.3
-0.1
phage
ICP3_phage_0.41_MOI_rep1
+0.0
+0.0
-0.1
+0.2
-0.2
lb_0.5%bileacids_anaerobic
LB_0.5%bileacids_Anaerobic_18HR_ZN21A
+0.0
+0.0
+0.0
-0.2
+0.2
lb_aerobic
LB_Aerobic_18HR_ZN18B
+0.0
+0.1
-0.0
-0.2
+0.2
lb_0.5%bileacids_aerobic
LB_0.5%bileacids_aerobic_120MIN_ZN11A
+0.1
+0.0
+0.1
-0.1
-0.0
lb_anaerobic
LB_Anaerobic_180MIN_ZN16A
+0.1
-0.0
+0.1
-0.1
-0.1
phage
ICP1_phage_235.3_MOI_rep2
+0.1
-0.2
+0.0
-0.0
+0.1
lb_anaerobic
LB_Anaerobic_18HR_ZN20A
+0.1
+0.0
+0.1
-0.1
+0.1
lb_0.5%bileacids_aerobic
LB_0.5%bileacids_aerobic_180MIN_ZN15A
+0.0
+0.0
+0.1
-0.2
+0.2
lb_anaerobic
LB_Anaerobic_180MIN_ZN16B
+0.1
-0.0
+0.1
-0.1
+0.1
phage
ICP1_phage_0.23_MOI_rep1
+0.0
-0.1
+0.0
-0.2
+0.5
phage
ICP3_phage_41.1_MOI_rep2
+0.2
-0.0
+0.2
+0.2
-0.2
lb_0.5%bileacids_aerobic
LB_0.5%bileacids_aerobic_18HR_ZN19A
+0.1
+0.1
+0.0
-0.0
+0.2
lb_anaerobic
LB_Anaerobic_60MIN_ZN4B
+0.1
-0.0
+0.0
+0.2
+0.2
lb_0.5%bileacids_anaerobic
LB_0.5%bileacids_Anaerobic_60MIN_ZN5A
+0.0
+0.0
+0.2
+0.2
+0.2
phage
ICP1_phage_0.23_MOI_rep2
+0.2
+0.1
-0.0
+0.2
+0.3
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