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Fitness for 5 genes in
Vibrio cholerae E7946 ATCC 55056
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
CSW01_12865 and CSW01_12870 are separated by 261 nucleotides
CSW01_12870 and CSW01_12875 are separated by 6 nucleotides
CSW01_12875 and CSW01_12880 overlap by 12 nucleotides
CSW01_12880 and CSW01_12885 are separated by 53 nucleotides
CSW01_12865: CSW01_12865 - thiamine ABC transporter substrate binding subunit, at 2,752,764 to 2,753,756
_12865
CSW01_12870: CSW01_12870 - aromatic acid decarboxylase, at 2,754,018 to 2,754,653
_12870
CSW01_12875: CSW01_12875 - UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl- meso-diaminopimelate ligase, at 2,754,660 to 2,756,015
_12875
CSW01_12880: CSW01_12880 - hypothetical protein, at 2,756,004 to 2,756,267
_12880
CSW01_12885: CSW01_12885 - fructose 1,6-bisphosphatase, at 2,756,321 to 2,757,331
_12885
Group
Condition
CSW01
_12865
CSW01
_12870
CSW01
_12875
CSW01
_12880
CSW01
_12885
phage
ICP3_phage_411_MOI_rep2
-0.4
N.D.
-0.6
-1.3
-2.5
phage
ICP3_phage_0.41_MOI_rep2
-0.3
N.D.
-0.2
-1.0
-2.3
phage
ICP1_phage_235.3_MOI_rep1
-0.3
N.D.
-0.2
-0.2
-2.9
phage
ICP1_phage_2.3_MOI_rep1
-0.3
N.D.
-0.3
-0.3
-2.6
phage
ICP3_phage_41.1_MOI_rep1
-0.4
N.D.
-0.3
-0.3
-2.2
phage
ICP1_phage_23.5_MOI_rep1
-0.4
N.D.
-0.3
-0.6
-1.9
phage
ICP3_phage_411_MOI_rep1
-0.4
N.D.
-0.3
+0.2
-2.5
phage
ICP3_phage_0.41_MOI_rep1
+0.1
N.D.
-0.3
-0.5
-2.1
phage
ICP1_phage_23.5_MOI_rep2
-0.3
N.D.
-0.3
+0.3
-2.4
phage
ICP1_phage_0.23_MOI_rep2
-0.1
N.D.
-0.3
-0.7
-1.6
phage
ICP3_phage_4.1_MOI_rep1
-0.3
N.D.
-0.1
+0.2
-2.4
phage
ICP1_phage_0.23_MOI_rep1
-0.2
N.D.
-0.4
-0.0
-2.0
phage
ICP1_phage_2.3_MOI_rep2
-0.2
N.D.
-0.0
-0.1
-2.1
phage
ICP1_phage_235.3_MOI_rep2
-0.2
N.D.
-0.4
-0.0
-1.9
phage
ICP3_phage_41.1_MOI_rep2
+0.4
N.D.
-0.6
-0.1
-1.8
phage
ICP3_phage_4.1_MOI_rep2
-0.0
N.D.
-0.5
-0.0
-1.5
lb_anaerobic
LB_Anaerobic_18HR_ZN20A
-0.1
N.D.
-0.6
+0.1
-0.6
lb_0.5%bileacids_aerobic
LB_0.5%bileacids_aerobic_18HR_ZN19B
-0.1
N.D.
-0.6
+0.2
-0.6
lb_anaerobic
LB_Anaerobic_18HR_ZN20B
-0.0
N.D.
-1.0
+0.0
-0.0
lb_0.5%bileacids_anaerobic
LB_0.5%bileacids_Anaerobic_18HR_ZN21A
+0.1
N.D.
-1.2
+0.2
-0.0
lb_0.5%bileacids_anaerobic
LB_0.5%bileacids_Anaerobic_120MIN_ZN13B
+0.0
N.D.
-0.1
-0.3
-0.2
lb_0.5%bileacids_anaerobic
LB_0.5%bileacids_Anaerobic_60MIN_ZN5B
-0.1
N.D.
-0.2
+0.1
-0.2
lb_aerobic
LB_Aerobic_60MIN_ZN2B
+0.1
N.D.
-0.2
+0.1
-0.2
lb_anaerobic
LB_Anaerobic_60MIN_ZN4B
-0.2
N.D.
-0.1
+0.4
-0.2
lb_aerobic
LB_Aerobic_18HR_ZN18B
-0.0
N.D.
+0.2
+0.1
-0.2
lb_0.5%bileacids_aerobic
LB_0.5%bileacids_aerobic_180MIN_ZN15B
-0.1
N.D.
-0.1
+0.4
-0.1
lb_0.5%bileacids_anaerobic
LB_0.5%bileacids_Anaerobic_180MIN_ZN17A
+0.3
N.D.
+0.2
-0.2
-0.0
lb_anaerobic
LB_Anaerobic_120MIN_ZN12B
+0.0
N.D.
+0.0
+0.4
-0.1
lb_0.5%bileacids_anaerobic
LB_0.5%bileacids_Anaerobic_60MIN_ZN5A
+0.2
N.D.
-0.0
+0.3
-0.0
lb_0.5%bileacids_aerobic
LB_0.5%bileacids_aerobic_18HR_ZN19A
+0.1
N.D.
+0.4
+0.4
+0.1
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