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Fitness for 5 genes in
Vibrio cholerae E7946 ATCC 55056
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
CSW01_12590 and CSW01_12595 are separated by 382 nucleotides
CSW01_12595 and CSW01_12600 are separated by 111 nucleotides
CSW01_12600 and CSW01_12605 are separated by 57 nucleotides
CSW01_12605 and CSW01_12610 are separated by 15 nucleotides
CSW01_12590: CSW01_12590 - TetR/AcrR family transcriptional regulator, at 2,700,578 to 2,701,213
_12590
CSW01_12595: CSW01_12595 - 2-isopropylmalate synthase, at 2,701,596 to 2,703,146
_12595
CSW01_12600: CSW01_12600 - 3-isopropylmalate dehydrogenase, at 2,703,258 to 2,704,349
_12600
CSW01_12605: CSW01_12605 - 3-isopropylmalate dehydratase large subunit, at 2,704,407 to 2,705,810
_12605
CSW01_12610: CSW01_12610 - 3-isopropylmalate dehydratase small subunit, at 2,705,826 to 2,706,428
_12610
Group
Condition
CSW01
_12590
CSW01
_12595
CSW01
_12600
CSW01
_12605
CSW01
_12610
phage
ICP1_phage_2.3_MOI_rep2
-0.1
-0.4
-0.2
-0.2
-1.6
phage
ICP1_phage_0.23_MOI_rep2
-0.5
-0.1
-0.4
-0.5
-0.9
phage
ICP3_phage_411_MOI_rep1
-0.6
+0.0
-0.2
-0.6
-0.8
phage
ICP3_phage_41.1_MOI_rep1
-0.2
-0.2
+0.1
-0.1
-1.4
phage
ICP1_phage_2.3_MOI_rep1
-0.3
-0.2
-0.0
-0.2
-1.1
phage
ICP3_phage_4.1_MOI_rep2
-0.4
-0.1
-0.2
-0.3
-0.8
phage
ICP1_phage_235.3_MOI_rep1
-0.2
-0.1
-0.3
-0.1
-1.1
phage
ICP1_phage_235.3_MOI_rep2
-0.8
-0.3
+0.2
-0.3
+0.1
phage
ICP1_phage_23.5_MOI_rep2
+0.1
-0.1
+0.1
-0.4
-0.6
phage
ICP1_phage_23.5_MOI_rep1
-0.3
-0.0
-0.3
+0.1
+0.2
lb_0.5%bileacids_anaerobic
LB_0.5%bileacids_Anaerobic_60MIN_ZN5B
-0.4
+0.0
+0.2
+0.2
-0.4
phage
ICP1_phage_0.23_MOI_rep1
+0.2
+0.4
-0.1
-0.2
-0.2
lb_0.5%bileacids_anaerobic
LB_0.5%bileacids_Anaerobic_120MIN_ZN13B
-0.1
+0.3
+0.1
+0.2
-0.4
lb_anaerobic
LB_Anaerobic_60MIN_ZN4B
-0.3
+0.0
-0.2
+0.2
+0.5
lb_aerobic
LB_Aerobic_60MIN_ZN2B
-0.3
+0.0
-0.0
+0.2
+0.4
lb_aerobic
LB_Aerobic_180MIN_ZN14A
-0.2
+0.2
+0.0
+0.2
+0.3
lb_aerobic
LB_Aerobic_18HR_ZN18B
-0.1
+0.1
+0.2
+0.2
+0.4
lb_0.5%bileacids_aerobic
LB_0.5%bileacids_aerobic_180MIN_ZN15A
-0.2
+0.4
+0.2
+0.2
+0.3
lb_anaerobic
LB_Anaerobic_180MIN_ZN16A
-0.0
+0.3
+0.2
+0.1
+0.4
lb_aerobic
LB_Aerobic_18HR_ZN18A
-0.1
+0.3
+0.0
+0.3
+0.5
lb_anaerobic
LB_Anaerobic_180MIN_ZN16B
+0.2
+0.2
+0.1
+0.1
+0.4
lb_0.5%bileacids_aerobic
LB_0.5%bileacids_aerobic_18HR_ZN19A
+0.1
+0.2
+0.0
+0.3
+0.5
lb_0.5%bileacids_anaerobic
LB_0.5%bileacids_Anaerobic_18HR_ZN21A
+0.2
+0.2
+0.0
+0.2
+0.4
lb_0.5%bileacids_aerobic
LB_0.5%bileacids_aerobic_120MIN_ZN11A
+0.1
+0.3
+0.3
+0.2
+0.3
lb_aerobic
LB_Aerobic_180MIN_ZN14B
+0.1
+0.2
+0.2
+0.2
+0.4
lb_0.5%bileacids_aerobic
LB_0.5%bileacids_aerobic_18HR_ZN19B
+0.1
+0.2
+0.0
+0.3
+0.7
lb_anaerobic
LB_Anaerobic_18HR_ZN20B
-0.0
+0.3
+0.2
+0.2
+0.6
lb_0.5%bileacids_anaerobic
LB_0.5%bileacids_Anaerobic_180MIN_ZN17B
-0.0
+0.3
+0.2
+0.3
+0.7
lb_anaerobic
LB_Anaerobic_120MIN_ZN12B
+0.2
+0.2
+0.0
+0.3
+0.8
lb_anaerobic
LB_Anaerobic_18HR_ZN20A
+0.1
+0.2
+0.1
+0.3
+1.0
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