Fitness for 5 genes in Vibrio cholerae E7946 ATCC 55056

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500 ntCSW01_12480 and CSW01_12485 are separated by 13 nucleotidesCSW01_12485 and CSW01_12490 are separated by 330 nucleotidesCSW01_12490 and CSW01_12495 overlap by 69 nucleotidesCSW01_12495 and CSW01_12500 are separated by 24 nucleotides CSW01_12480: CSW01_12480 - sigma-E factor negative regulatory protein RseA, at 2,679,941 to 2,680,579 _12480 CSW01_12485: CSW01_12485 - RNA polymerase sigma factor RpoE, at 2,680,593 to 2,681,165 _12485 CSW01_12490: CSW01_12490 - hypothetical protein, at 2,681,496 to 2,681,693 _12490 CSW01_12495: CSW01_12495 - L-aspartate oxidase, at 2,681,625 to 2,683,277 _12495 CSW01_12500: CSW01_12500 - hypothetical protein, at 2,683,302 to 2,683,664 _12500
Group Condition CSW01_12480 CSW01_12485 CSW01_12490 CSW01_12495 CSW01_12500
phage ICP3_phage_4.1_MOI_rep1 -1.8 N.D. N.D. -0.0 +0.1
lb_0.5%bileacids_anaerobic LB_0.5%bileacids_Anaerobic_180MIN_ZN17A -1.0 N.D. N.D. +0.0 +0.0
lb_anaerobic LB_Anaerobic_18HR_ZN20A -1.0 N.D. N.D. +0.1 +0.1
lb_aerobic LB_Aerobic_18HR_ZN18A -0.8 N.D. N.D. +0.0 -0.0
lb_0.5%bileacids_aerobic LB_0.5%bileacids_aerobic_180MIN_ZN15A -0.8 N.D. N.D. +0.1 +0.1
phage ICP1_phage_235.3_MOI_rep2 -0.7 N.D. N.D. +0.1 -0.0
phage ICP3_phage_411_MOI_rep2 -0.3 N.D. N.D. -0.0 -0.3
lb_0.5%bileacids_anaerobic LB_0.5%bileacids_Anaerobic_18HR_ZN21A -0.5 N.D. N.D. -0.0 +0.1
phage ICP1_phage_2.3_MOI_rep2 -0.7 N.D. N.D. -0.1 +0.4
lb_anaerobic LB_Anaerobic_120MIN_ZN12A -0.4 N.D. N.D. -0.1 +0.1
lb_aerobic LB_Aerobic_60MIN_ZN2B +0.1 N.D. N.D. -0.0 -0.4
phage ICP3_phage_41.1_MOI_rep2 -0.5 N.D. N.D. +0.1 +0.1
lb_anaerobic LB_Anaerobic_18HR_ZN20B -0.6 N.D. N.D. +0.1 +0.2
lb_0.5%bileacids_anaerobic LB_0.5%bileacids_Anaerobic_120MIN_ZN13B -0.4 N.D. N.D. +0.1 +0.1
phage ICP1_phage_235.3_MOI_rep1 +0.4 N.D. N.D. -0.2 -0.4
lb_aerobic LB_Aerobic_18HR_ZN18B -0.3 N.D. N.D. +0.1 +0.1
lb_0.5%bileacids_aerobic LB_0.5%bileacids_aerobic_18HR_ZN19A -0.1 N.D. N.D. +0.2 +0.2
lb_0.5%bileacids_anaerobic LB_0.5%bileacids_Anaerobic_60MIN_ZN5A +0.5 N.D. N.D. -0.2 +0.1
lb_0.5%bileacids_aerobic LB_0.5%bileacids_aerobic_18HR_ZN19B -0.1 N.D. N.D. +0.1 +0.3
phage ICP3_phage_0.41_MOI_rep2 -0.1 N.D. N.D. -0.0 +0.5
lb_0.5%bileacids_anaerobic LB_0.5%bileacids_Anaerobic_60MIN_ZN5B +0.4 N.D. N.D. +0.1 +0.0
lb_anaerobic LB_Anaerobic_180MIN_ZN16A +0.4 N.D. N.D. +0.2 +0.1
lb_0.5%bileacids_anaerobic LB_0.5%bileacids_Anaerobic_120MIN_ZN13A +0.5 N.D. N.D. +0.1 +0.1
phage ICP3_phage_411_MOI_rep1 +0.7 N.D. N.D. +0.0 +0.1
lb_aerobic LB_Aerobic_180MIN_ZN14B +0.2 N.D. N.D. +0.2 +0.4
phage ICP1_phage_2.3_MOI_rep1 +1.3 N.D. N.D. -0.2 -0.2
phage ICP3_phage_4.1_MOI_rep2 +1.3 N.D. N.D. -0.2 +0.1
phage ICP3_phage_0.41_MOI_rep1 +1.5 N.D. N.D. -0.1 -0.2
phage ICP1_phage_0.23_MOI_rep1 +1.7 N.D. N.D. +0.0 -0.1
phage ICP1_phage_0.23_MOI_rep2 +1.8 N.D. N.D. -0.1 +0.4
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CSW01_12480
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CSW01_12485
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CSW01_12495
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CSW01_12500
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