Fitness for 5 genes in Vibrio cholerae E7946 ATCC 55056

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500 ntCSW01_12475 and CSW01_12480 overlap by 4 nucleotidesCSW01_12480 and CSW01_12485 are separated by 13 nucleotidesCSW01_12485 and CSW01_12490 are separated by 330 nucleotidesCSW01_12490 and CSW01_12495 overlap by 69 nucleotides CSW01_12475: CSW01_12475 - sigma-E factor regulatory protein RseB, at 2,678,979 to 2,679,944 _12475 CSW01_12480: CSW01_12480 - sigma-E factor negative regulatory protein RseA, at 2,679,941 to 2,680,579 _12480 CSW01_12485: CSW01_12485 - RNA polymerase sigma factor RpoE, at 2,680,593 to 2,681,165 _12485 CSW01_12490: CSW01_12490 - hypothetical protein, at 2,681,496 to 2,681,693 _12490 CSW01_12495: CSW01_12495 - L-aspartate oxidase, at 2,681,625 to 2,683,277 _12495
Group Condition CSW01_12475 CSW01_12480 CSW01_12485 CSW01_12490 CSW01_12495
phage ICP3_phage_4.1_MOI_rep1 N.D. -1.8 N.D. N.D. -0.0
lb_0.5%bileacids_anaerobic LB_0.5%bileacids_Anaerobic_180MIN_ZN17A N.D. -1.0 N.D. N.D. +0.0
lb_anaerobic LB_Anaerobic_18HR_ZN20A N.D. -1.0 N.D. N.D. +0.1
phage ICP1_phage_2.3_MOI_rep2 N.D. -0.7 N.D. N.D. -0.1
lb_aerobic LB_Aerobic_18HR_ZN18A N.D. -0.8 N.D. N.D. +0.0
lb_0.5%bileacids_aerobic LB_0.5%bileacids_aerobic_180MIN_ZN15A N.D. -0.8 N.D. N.D. +0.1
phage ICP1_phage_235.3_MOI_rep2 N.D. -0.7 N.D. N.D. +0.1
lb_0.5%bileacids_anaerobic LB_0.5%bileacids_Anaerobic_18HR_ZN21A N.D. -0.5 N.D. N.D. -0.0
lb_anaerobic LB_Anaerobic_120MIN_ZN12A N.D. -0.4 N.D. N.D. -0.1
lb_anaerobic LB_Anaerobic_18HR_ZN20B N.D. -0.6 N.D. N.D. +0.1
phage ICP3_phage_41.1_MOI_rep2 N.D. -0.5 N.D. N.D. +0.1
lb_0.5%bileacids_anaerobic LB_0.5%bileacids_Anaerobic_120MIN_ZN13B N.D. -0.4 N.D. N.D. +0.1
phage ICP1_phage_23.5_MOI_rep2 N.D. -0.3 N.D. N.D. +0.0
phage ICP3_phage_411_MOI_rep2 N.D. -0.3 N.D. N.D. -0.0
lb_aerobic LB_Aerobic_18HR_ZN18B N.D. -0.3 N.D. N.D. +0.1
lb_0.5%bileacids_anaerobic LB_0.5%bileacids_Anaerobic_180MIN_ZN17B N.D. -0.3 N.D. N.D. +0.1
lb_0.5%bileacids_aerobic LB_0.5%bileacids_aerobic_18HR_ZN19A N.D. -0.1 N.D. N.D. +0.2
phage ICP1_phage_235.3_MOI_rep1 N.D. +0.4 N.D. N.D. -0.2
lb_anaerobic LB_Anaerobic_180MIN_ZN16B N.D. +0.1 N.D. N.D. +0.2
lb_0.5%bileacids_anaerobic LB_0.5%bileacids_Anaerobic_60MIN_ZN5A N.D. +0.5 N.D. N.D. -0.2
lb_aerobic LB_Aerobic_180MIN_ZN14B N.D. +0.2 N.D. N.D. +0.2
lb_anaerobic LB_Anaerobic_180MIN_ZN16A N.D. +0.4 N.D. N.D. +0.2
lb_0.5%bileacids_anaerobic LB_0.5%bileacids_Anaerobic_60MIN_ZN5B N.D. +0.4 N.D. N.D. +0.1
lb_0.5%bileacids_anaerobic LB_0.5%bileacids_Anaerobic_120MIN_ZN13A N.D. +0.5 N.D. N.D. +0.1
phage ICP3_phage_411_MOI_rep1 N.D. +0.7 N.D. N.D. +0.0
phage ICP1_phage_2.3_MOI_rep1 N.D. +1.3 N.D. N.D. -0.2
phage ICP3_phage_4.1_MOI_rep2 N.D. +1.3 N.D. N.D. -0.2
phage ICP3_phage_0.41_MOI_rep1 N.D. +1.5 N.D. N.D. -0.1
phage ICP1_phage_0.23_MOI_rep2 N.D. +1.8 N.D. N.D. -0.1
phage ICP1_phage_0.23_MOI_rep1 N.D. +1.7 N.D. N.D. +0.0
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CSW01_12475
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CSW01_12480
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CSW01_12490
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CSW01_12495
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