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Fitness for 5 genes in
Vibrio cholerae E7946 ATCC 55056
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
CSW01_12390 and CSW01_12395 are separated by 78 nucleotides
CSW01_12395 and CSW01_12400 are separated by 274 nucleotides
CSW01_12400 and CSW01_12405 are separated by 99 nucleotides
CSW01_12405 and CSW01_12410 are separated by 63 nucleotides
CSW01_12390: CSW01_12390 - enolase, at 2,658,035 to 2,659,336
_12390
CSW01_12395: CSW01_12395 - CTP synthetase, at 2,659,415 to 2,661,052
_12395
CSW01_12400: CSW01_12400 - nucleoside triphosphate pyrophosphohydrolase, at 2,661,327 to 2,662,142
_12400
CSW01_12405: CSW01_12405 - GTP diphosphokinase, at 2,662,242 to 2,664,458
_12405
CSW01_12410: CSW01_12410 - 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD, at 2,664,522 to 2,665,844
_12410
Group
Condition
CSW01
_12390
CSW01
_12395
CSW01
_12400
CSW01
_12405
CSW01
_12410
phage
ICP1_phage_2.3_MOI_rep2
N.D.
N.D.
-0.3
-0.2
-0.1
lb_anaerobic
LB_Anaerobic_18HR_ZN20B
N.D.
N.D.
-0.0
-0.6
+0.1
lb_0.5%bileacids_anaerobic
LB_0.5%bileacids_Anaerobic_18HR_ZN21A
N.D.
N.D.
+0.1
-0.5
-0.0
phage
ICP3_phage_4.1_MOI_rep2
N.D.
N.D.
-0.1
-0.2
-0.1
phage
ICP3_phage_4.1_MOI_rep1
N.D.
N.D.
-0.1
-0.2
-0.1
phage
ICP3_phage_41.1_MOI_rep1
N.D.
N.D.
+0.1
-0.2
-0.3
phage
ICP1_phage_235.3_MOI_rep1
N.D.
N.D.
-0.0
-0.3
+0.0
phage
NoPhageControl
N.D.
N.D.
-0.1
-0.1
-0.1
lb_0.5%bileacids_anaerobic
LB_0.5%bileacids_Anaerobic_120MIN_ZN13A
N.D.
N.D.
-0.0
-0.2
+0.1
lb_aerobic
LB_Aerobic_60MIN_ZN2B
N.D.
N.D.
-0.1
+0.1
-0.1
phage
ICP3_phage_41.1_MOI_rep2
N.D.
N.D.
-0.1
-0.1
+0.2
lb_anaerobic
LB_Anaerobic_120MIN_ZN12B
N.D.
N.D.
+0.2
-0.2
+0.0
lb_anaerobic
LB_Anaerobic_60MIN_ZN4B
N.D.
N.D.
-0.0
+0.1
-0.1
phage
ICP3_phage_411_MOI_rep2
N.D.
N.D.
+0.3
-0.1
-0.1
phage
ICP1_phage_0.23_MOI_rep1
N.D.
N.D.
-0.3
+0.2
+0.2
phage
ICP3_phage_0.41_MOI_rep2
N.D.
N.D.
-0.0
+0.1
-0.1
phage
ICP1_phage_23.5_MOI_rep1
N.D.
N.D.
+0.2
-0.1
-0.0
phage
ICP1_phage_235.3_MOI_rep2
N.D.
N.D.
+0.3
-0.1
-0.0
lb_anaerobic
LB_Anaerobic_18HR_ZN20A
N.D.
N.D.
+0.1
-0.0
+0.1
lb_aerobic
LB_Aerobic_180MIN_ZN14B
N.D.
N.D.
+0.0
+0.2
+0.0
lb_aerobic
LB_Aerobic_18HR_ZN18A
N.D.
N.D.
+0.0
+0.1
+0.1
lb_aerobic
LB_Aerobic_180MIN_ZN14A
N.D.
N.D.
+0.1
+0.2
+0.1
lb_0.5%bileacids_anaerobic
LB_0.5%bileacids_Anaerobic_60MIN_ZN5B
N.D.
N.D.
+0.1
+0.2
+0.0
lb_0.5%bileacids_aerobic
LB_0.5%bileacids_aerobic_180MIN_ZN15A
N.D.
N.D.
+0.1
+0.1
+0.1
phage
ICP1_phage_0.23_MOI_rep2
N.D.
N.D.
+0.3
+0.2
-0.1
lb_aerobic
LB_Aerobic_120MIN_ZN10B
N.D.
N.D.
+0.1
+0.1
+0.1
lb_0.5%bileacids_anaerobic
LB_0.5%bileacids_Anaerobic_180MIN_ZN17B
N.D.
N.D.
+0.0
+0.2
+0.1
lb_0.5%bileacids_aerobic
LB_0.5%bileacids_aerobic_18HR_ZN19A
N.D.
N.D.
-0.0
+0.3
+0.1
lb_0.5%bileacids_aerobic
LB_0.5%bileacids_aerobic_120MIN_ZN11A
N.D.
N.D.
+0.1
+0.2
+0.1
lb_aerobic
LB_Aerobic_18HR_ZN18B
N.D.
N.D.
-0.0
+0.3
+0.2
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