Fitness for 5 genes in Vibrio cholerae E7946 ATCC 55056

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500 ntCSW01_12260 and CSW01_12265 are separated by 295 nucleotidesCSW01_12265 and CSW01_12270 are separated by 244 nucleotidesCSW01_12270 and CSW01_12275 overlap by 1 nucleotidesCSW01_12275 and CSW01_12280 are separated by 42 nucleotides CSW01_12260: CSW01_12260 - 1,6-anhydro-N-acetylmuramyl-L-alanine amidase AmpD, at 2,626,635 to 2,627,180 _12260 CSW01_12265: CSW01_12265 - carboxylating nicotinate-nucleotide diphosphorylase, at 2,627,476 to 2,628,366 _12265 CSW01_12270: CSW01_12270 - prepilin-type cleavage/methylation domain-containing protein, at 2,628,611 to 2,629,072 _12270 CSW01_12275: CSW01_12275 - type IV-A pilus assembly ATPase PilB, at 2,629,072 to 2,630,760 _12275 CSW01_12280: CSW01_12280 - type IV pilin assembly protein PilC, at 2,630,803 to 2,632,029 _12280
Group Condition CSW01_12260 CSW01_12265 CSW01_12270 CSW01_12275 CSW01_12280
phage ICP3_phage_411_MOI_rep2 -0.3 -0.7 -0.6 -0.1 -0.0
lb_0.5%bileacids_anaerobic LB_0.5%bileacids_Anaerobic_18HR_ZN21A -1.4 -0.0 -0.0 +0.0 +0.1
phage ICP3_phage_4.1_MOI_rep2 -0.7 -0.4 -0.2 +0.0 +0.0
phage ICP3_phage_41.1_MOI_rep2 -0.7 -0.3 +0.2 +0.0 -0.3
phage ICP1_phage_235.3_MOI_rep1 -0.6 -0.4 -0.1 +0.2 -0.1
phage ICP1_phage_2.3_MOI_rep2 -1.0 -0.3 +0.2 +0.1 -0.1
phage ICP3_phage_0.41_MOI_rep2 -0.6 -0.3 +0.0 +0.0 -0.2
lb_anaerobic LB_Anaerobic_18HR_ZN20B -1.0 -0.0 -0.1 +0.0 +0.0
phage ICP3_phage_41.1_MOI_rep1 -0.4 -0.4 +0.0 -0.0 -0.1
phage ICP1_phage_235.3_MOI_rep2 -0.6 -0.2 +0.1 +0.1 -0.2
phage ICP1_phage_2.3_MOI_rep1 -0.7 -0.3 +0.3 -0.1 -0.1
phage ICP1_phage_23.5_MOI_rep2 -0.1 -0.6 +0.0 +0.0 -0.2
phage ICP1_phage_23.5_MOI_rep1 -0.8 -0.4 +0.4 -0.1 +0.1
phage ICP1_phage_0.23_MOI_rep1 -0.5 -0.3 +0.0 +0.3 -0.1
phage ICP3_phage_0.41_MOI_rep1 -0.2 -0.6 +0.4 +0.1 -0.2
lb_0.5%bileacids_aerobic LB_0.5%bileacids_aerobic_18HR_ZN19B -0.6 -0.0 -0.0 +0.0 +0.2
lb_aerobic LB_Aerobic_60MIN_ZN2B -0.3 +0.1 -0.1 +0.0 +0.0
lb_anaerobic LB_Anaerobic_18HR_ZN20A -0.6 +0.1 -0.0 +0.1 +0.2
phage ICP3_phage_411_MOI_rep1 -0.1 -0.5 +0.2 +0.2 +0.2
lb_aerobic LB_Aerobic_18HR_ZN18A -0.2 +0.1 -0.1 +0.1 +0.1
phage ICP3_phage_4.1_MOI_rep1 -0.1 -0.4 +0.5 +0.2 -0.1
phage ICP1_phage_0.23_MOI_rep2 +0.1 -0.3 +0.1 +0.4 -0.1
lb_aerobic LB_Aerobic_120MIN_ZN10B -0.1 +0.1 -0.1 +0.1 +0.1
lb_0.5%bileacids_aerobic LB_0.5%bileacids_aerobic_180MIN_ZN15B -0.0 +0.2 -0.1 +0.1 +0.1
lb_aerobic_phage LB_Aerobic_PHAGE INFX20MPI_ZN6A -0.1 +0.1 +0.0 +0.2 +0.2
lb_anaerobic LB_Anaerobic_180MIN_ZN16B +0.1 +0.2 -0.0 +0.2 +0.1
lb_0.5%bileacids_anaerobic LB_0.5%bileacids_Anaerobic_180MIN_ZN17B +0.0 +0.2 +0.1 +0.1 +0.1
lb_0.5%bileacids_aerobic LB_0.5%bileacids_aerobic_18HR_ZN19A +0.2 -0.0 +0.0 +0.1 +0.2
lb_0.5%bileacids_aerobic LB_0.5%bileacids_aerobic_180MIN_ZN15A +0.1 +0.1 +0.1 +0.2 +0.1
lb_0.5%bileacids_aerobic LB_0.5%bileacids_aerobic_120MIN_ZN11A +0.1 +0.2 +0.2 +0.2 +0.1
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CSW01_12260
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CSW01_12265
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CSW01_12280
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