Fitness for 5 genes in Vibrio cholerae E7946 ATCC 55056

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500 ntCSW01_12250 and CSW01_12255 are separated by 137 nucleotidesCSW01_12255 and CSW01_12260 are separated by 277 nucleotidesCSW01_12260 and CSW01_12265 are separated by 295 nucleotidesCSW01_12265 and CSW01_12270 are separated by 244 nucleotides CSW01_12250: CSW01_12250 - site-specific tyrosine recombinase XerD, at 2,624,793 to 2,625,701 _12250 CSW01_12255: CSW01_12255 - flavodoxin FldB, at 2,625,839 to 2,626,357 _12255 CSW01_12260: CSW01_12260 - 1,6-anhydro-N-acetylmuramyl-L-alanine amidase AmpD, at 2,626,635 to 2,627,180 _12260 CSW01_12265: CSW01_12265 - carboxylating nicotinate-nucleotide diphosphorylase, at 2,627,476 to 2,628,366 _12265 CSW01_12270: CSW01_12270 - prepilin-type cleavage/methylation domain-containing protein, at 2,628,611 to 2,629,072 _12270
Group Condition CSW01_12250 CSW01_12255 CSW01_12260 CSW01_12265 CSW01_12270
phage ICP1_phage_235.3_MOI_rep1 -1.2 -3.2 -0.6 -0.4 -0.1
lb_0.5%bileacids_aerobic LB_0.5%bileacids_aerobic_18HR_ZN19B -4.4 -0.2 -0.6 -0.0 -0.0
lb_anaerobic LB_Anaerobic_18HR_ZN20A -4.4 +0.0 -0.6 +0.1 -0.0
phage ICP3_phage_411_MOI_rep2 -1.1 -1.9 -0.3 -0.7 -0.6
phage ICP1_phage_2.3_MOI_rep2 -1.5 -1.2 -1.0 -0.3 +0.2
phage ICP3_phage_4.1_MOI_rep2 -1.3 -1.0 -0.7 -0.4 -0.2
phage ICP3_phage_41.1_MOI_rep2 -1.1 -1.4 -0.7 -0.3 +0.2
phage ICP3_phage_0.41_MOI_rep2 -1.1 -1.3 -0.6 -0.3 +0.0
lb_aerobic LB_Aerobic_18HR_ZN18B -2.4 -1.0 +0.2 +0.0 -0.1
phage ICP1_phage_235.3_MOI_rep2 -1.1 -1.4 -0.6 -0.2 +0.1
phage ICP1_phage_23.5_MOI_rep2 -0.8 -1.6 -0.1 -0.6 +0.0
phage ICP3_phage_41.1_MOI_rep1 -0.6 -1.6 -0.4 -0.4 +0.0
phage NoPhageControl -1.7 -1.1 -0.1 +0.0 +0.1
lb_0.5%bileacids_aerobic LB_0.5%bileacids_aerobic_18HR_ZN19A -2.3 -0.7 +0.2 -0.0 +0.0
lb_0.5%bileacids_anaerobic LB_0.5%bileacids_Anaerobic_18HR_ZN21A -1.0 -0.1 -1.4 -0.0 -0.0
phage ICP1_phage_0.23_MOI_rep2 -0.8 -1.6 +0.1 -0.3 +0.1
phage ICP1_phage_23.5_MOI_rep1 -0.9 -0.8 -0.8 -0.4 +0.4
lb_0.5%bileacids_aerobic LB_0.5%bileacids_aerobic_180MIN_ZN15B -1.9 -0.6 -0.0 +0.2 -0.1
lb_0.5%bileacids_aerobic LB_0.5%bileacids_aerobic_180MIN_ZN15A -1.7 -1.0 +0.1 +0.1 +0.1
phage ICP3_phage_4.1_MOI_rep1 -1.3 -1.0 -0.1 -0.4 +0.5
phage NoPhageControl -1.8 -0.3 -0.1 -0.0 +0.0
lb_anaerobic LB_Anaerobic_18HR_ZN20B -1.1 +0.1 -1.0 -0.0 -0.1
lb_0.5%bileacids_aerobic LB_0.5%bileacids_aerobic_120MIN_ZN11B -0.9 -1.1 +0.0 -0.0 -0.2
phage ICP3_phage_411_MOI_rep1 -0.9 -0.7 -0.1 -0.5 +0.2
lb_aerobic LB_Aerobic_18HR_ZN18A -1.6 -0.2 -0.2 +0.1 -0.1
lb_aerobic LB_Aerobic_120MIN_ZN10B -1.0 -0.9 -0.1 +0.1 -0.1
phage ICP1_phage_2.3_MOI_rep1 -0.9 -0.3 -0.7 -0.3 +0.3
phage ICP3_phage_0.41_MOI_rep1 -0.7 -0.8 -0.2 -0.6 +0.4
lb_aerobic LB_Aerobic_180MIN_ZN14B -1.4 -0.6 +0.1 +0.1 -0.0
lb_anaerobic LB_Anaerobic_180MIN_ZN16A -1.9 -0.0 +0.0 +0.2 +0.0
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