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Fitness for 5 genes in
Vibrio cholerae E7946 ATCC 55056
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
CSW01_12250 and CSW01_12255 are separated by 137 nucleotides
CSW01_12255 and CSW01_12260 are separated by 277 nucleotides
CSW01_12260 and CSW01_12265 are separated by 295 nucleotides
CSW01_12265 and CSW01_12270 are separated by 244 nucleotides
CSW01_12250: CSW01_12250 - site-specific tyrosine recombinase XerD, at 2,624,793 to 2,625,701
_12250
CSW01_12255: CSW01_12255 - flavodoxin FldB, at 2,625,839 to 2,626,357
_12255
CSW01_12260: CSW01_12260 - 1,6-anhydro-N-acetylmuramyl-L-alanine amidase AmpD, at 2,626,635 to 2,627,180
_12260
CSW01_12265: CSW01_12265 - carboxylating nicotinate-nucleotide diphosphorylase, at 2,627,476 to 2,628,366
_12265
CSW01_12270: CSW01_12270 - prepilin-type cleavage/methylation domain-containing protein, at 2,628,611 to 2,629,072
_12270
Group
Condition
CSW01
_12250
CSW01
_12255
CSW01
_12260
CSW01
_12265
CSW01
_12270
phage
ICP1_phage_235.3_MOI_rep1
-1.2
-3.2
-0.6
-0.4
-0.1
lb_0.5%bileacids_aerobic
LB_0.5%bileacids_aerobic_18HR_ZN19B
-4.4
-0.2
-0.6
-0.0
-0.0
lb_anaerobic
LB_Anaerobic_18HR_ZN20A
-4.4
+0.0
-0.6
+0.1
-0.0
phage
ICP3_phage_411_MOI_rep2
-1.1
-1.9
-0.3
-0.7
-0.6
phage
ICP1_phage_2.3_MOI_rep2
-1.5
-1.2
-1.0
-0.3
+0.2
phage
ICP3_phage_4.1_MOI_rep2
-1.3
-1.0
-0.7
-0.4
-0.2
phage
ICP3_phage_41.1_MOI_rep2
-1.1
-1.4
-0.7
-0.3
+0.2
phage
ICP3_phage_0.41_MOI_rep2
-1.1
-1.3
-0.6
-0.3
+0.0
lb_aerobic
LB_Aerobic_18HR_ZN18B
-2.4
-1.0
+0.2
+0.0
-0.1
phage
ICP1_phage_235.3_MOI_rep2
-1.1
-1.4
-0.6
-0.2
+0.1
phage
ICP1_phage_23.5_MOI_rep2
-0.8
-1.6
-0.1
-0.6
+0.0
phage
ICP3_phage_41.1_MOI_rep1
-0.6
-1.6
-0.4
-0.4
+0.0
phage
NoPhageControl
-1.7
-1.1
-0.1
+0.0
+0.1
lb_0.5%bileacids_aerobic
LB_0.5%bileacids_aerobic_18HR_ZN19A
-2.3
-0.7
+0.2
-0.0
+0.0
lb_0.5%bileacids_anaerobic
LB_0.5%bileacids_Anaerobic_18HR_ZN21A
-1.0
-0.1
-1.4
-0.0
-0.0
phage
ICP1_phage_0.23_MOI_rep2
-0.8
-1.6
+0.1
-0.3
+0.1
phage
ICP1_phage_23.5_MOI_rep1
-0.9
-0.8
-0.8
-0.4
+0.4
lb_0.5%bileacids_aerobic
LB_0.5%bileacids_aerobic_180MIN_ZN15B
-1.9
-0.6
-0.0
+0.2
-0.1
lb_0.5%bileacids_aerobic
LB_0.5%bileacids_aerobic_180MIN_ZN15A
-1.7
-1.0
+0.1
+0.1
+0.1
phage
ICP3_phage_4.1_MOI_rep1
-1.3
-1.0
-0.1
-0.4
+0.5
phage
NoPhageControl
-1.8
-0.3
-0.1
-0.0
+0.0
lb_anaerobic
LB_Anaerobic_18HR_ZN20B
-1.1
+0.1
-1.0
-0.0
-0.1
lb_0.5%bileacids_aerobic
LB_0.5%bileacids_aerobic_120MIN_ZN11B
-0.9
-1.1
+0.0
-0.0
-0.2
phage
ICP3_phage_411_MOI_rep1
-0.9
-0.7
-0.1
-0.5
+0.2
lb_aerobic
LB_Aerobic_18HR_ZN18A
-1.6
-0.2
-0.2
+0.1
-0.1
lb_aerobic
LB_Aerobic_120MIN_ZN10B
-1.0
-0.9
-0.1
+0.1
-0.1
phage
ICP1_phage_2.3_MOI_rep1
-0.9
-0.3
-0.7
-0.3
+0.3
phage
ICP3_phage_0.41_MOI_rep1
-0.7
-0.8
-0.2
-0.6
+0.4
lb_aerobic
LB_Aerobic_180MIN_ZN14B
-1.4
-0.6
+0.1
+0.1
-0.0
lb_anaerobic
LB_Anaerobic_180MIN_ZN16A
-1.9
-0.0
+0.0
+0.2
+0.0
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