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Fitness for 5 genes in
Vibrio cholerae E7946 ATCC 55056
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
CSW01_11820 and CSW01_11825 are separated by 189 nucleotides
CSW01_11825 and CSW01_11830 overlap by 17 nucleotides
CSW01_11830 and CSW01_11835 overlap by 4 nucleotides
CSW01_11835 and CSW01_11840 are separated by 158 nucleotides
CSW01_11820: CSW01_11820 - RimK family alpha-L-glutamate ligase, at 2,514,186 to 2,515,637
_11820
CSW01_11825: CSW01_11825 - zinc transporter ZntB, at 2,515,827 to 2,516,810
_11825
CSW01_11830: CSW01_11830 - gamma-glutamylcyclotransferase, at 2,516,794 to 2,517,381
_11830
CSW01_11835: CSW01_11835 - tRNA-binding protein, at 2,517,378 to 2,517,722
_11835
CSW01_11840: CSW01_11840 - DNA-binding transcriptional regulator GalS, at 2,517,881 to 2,518,888
_11840
Group
Condition
CSW01
_11820
CSW01
_11825
CSW01
_11830
CSW01
_11835
CSW01
_11840
lb_0.5%bileacids_aerobic
LB_0.5%bileacids_aerobic_120MIN_ZN11A
-0.0
-0.2
-0.1
-0.2
-0.1
lb_0.5%bileacids_anaerobic
LB_0.5%bileacids_Anaerobic_18HR_ZN21A
-0.0
-0.0
+0.0
-0.3
-0.1
lb_0.5%bileacids_anaerobic
LB_0.5%bileacids_Anaerobic_60MIN_ZN5B
-0.0
-0.1
-0.1
-0.2
-0.1
lb_0.5%bileacids_anaerobic
LB_0.5%bileacids_Anaerobic_120MIN_ZN13A
+0.0
-0.0
-0.0
-0.3
-0.2
lb_0.5%bileacids_anaerobic
LB_0.5%bileacids_Anaerobic_180MIN_ZN17B
-0.1
-0.1
+0.1
-0.3
-0.1
lb_aerobic
LB_Aerobic_18HR_ZN18A
-0.0
-0.1
+0.0
-0.3
+0.1
lb_0.5%bileacids_aerobic
LB_0.5%bileacids_aerobic_18HR_ZN19A
-0.1
-0.2
+0.1
-0.3
+0.1
phage
ICP1_phage_23.5_MOI_rep1
-0.0
+0.5
-0.3
-0.4
+0.0
lb_0.5%bileacids_aerobic
LB_0.5%bileacids_aerobic_180MIN_ZN15A
+0.1
-0.1
+0.1
-0.2
-0.1
lb_aerobic
LB_Aerobic_60MIN_ZN2B
+0.1
-0.1
+0.1
-0.3
+0.2
lb_aerobic
LB_Aerobic_180MIN_ZN14B
+0.1
-0.0
+0.1
-0.2
+0.0
lb_0.5%bileacids_anaerobic
LB_0.5%bileacids_Anaerobic_180MIN_ZN17A
+0.1
-0.0
+0.2
-0.2
-0.0
lb_0.5%bileacids_aerobic
LB_0.5%bileacids_aerobic_18HR_ZN19B
-0.0
+0.0
+0.1
-0.3
+0.2
lb_anaerobic
LB_Anaerobic_18HR_ZN20A
-0.0
+0.1
+0.1
-0.3
+0.2
lb_aerobic
LB_Aerobic_18HR_ZN18B
-0.1
+0.0
+0.1
-0.1
+0.2
phage
ICP3_phage_0.41_MOI_rep2
-0.1
+0.2
-0.2
+0.1
+0.0
phage
NoPhageControl
+0.1
+0.1
+0.1
-0.1
+0.1
phage
ICP3_phage_0.41_MOI_rep1
+0.3
+0.4
-0.1
-0.4
+0.1
phage
ICP3_phage_41.1_MOI_rep2
+0.3
+0.4
-0.2
+0.1
-0.3
phage
ICP3_phage_411_MOI_rep1
-0.3
+0.7
+0.4
-0.3
-0.2
phage
ICP1_phage_0.23_MOI_rep1
+0.0
+0.1
-0.1
+0.4
-0.2
phage
ICP3_phage_4.1_MOI_rep2
+0.2
+0.5
-0.0
-0.3
+0.2
phage
ICP1_phage_235.3_MOI_rep2
+0.1
+0.6
+0.1
-0.4
+0.2
phage
ICP1_phage_235.3_MOI_rep1
-0.0
+0.4
+0.1
+0.1
+0.1
phage
ICP1_phage_2.3_MOI_rep1
+0.1
+0.3
-0.5
+0.5
+0.3
phage
ICP1_phage_23.5_MOI_rep2
-0.0
+0.4
+0.3
-0.0
+0.1
phage
ICP1_phage_2.3_MOI_rep2
+0.1
+0.3
+0.2
+0.1
+0.1
phage
ICP3_phage_41.1_MOI_rep1
+0.2
+0.8
-0.2
+0.0
+0.1
phage
ICP1_phage_0.23_MOI_rep2
+0.1
+0.2
+0.3
+0.2
+0.2
phage
ICP3_phage_411_MOI_rep2
-0.1
+0.7
+0.3
+0.2
+0.0
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