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Fitness for 5 genes in
Vibrio cholerae E7946 ATCC 55056
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
CSW01_11800 and CSW01_11805 are separated by 406 nucleotides
CSW01_11805 and CSW01_11810 are separated by 81 nucleotides
CSW01_11810 and CSW01_11815 are separated by 102 nucleotides
CSW01_11815 and CSW01_11820 are separated by 204 nucleotides
CSW01_11800: CSW01_11800 - hydroxyacid dehydrogenase, at 2,509,715 to 2,510,023
_11800
CSW01_11805: CSW01_11805 - 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase, at 2,510,430 to 2,511,461
_11805
CSW01_11810: CSW01_11810 - short-chain dehydrogenase, at 2,511,543 to 2,512,787
_11810
CSW01_11815: CSW01_11815 - GNAT family N-acetyltransferase, at 2,512,890 to 2,513,981
_11815
CSW01_11820: CSW01_11820 - RimK family alpha-L-glutamate ligase, at 2,514,186 to 2,515,637
_11820
Group
Condition
CSW01
_11800
CSW01
_11805
CSW01
_11810
CSW01
_11815
CSW01
_11820
phage
ICP3_phage_411_MOI_rep1
-1.1
N.D.
-0.2
+0.1
-0.3
phage
ICP3_phage_0.41_MOI_rep1
-1.5
N.D.
-0.2
+0.1
+0.3
phage
ICP1_phage_2.3_MOI_rep1
-1.2
N.D.
+0.1
+0.0
+0.1
phage
ICP3_phage_0.41_MOI_rep2
-0.2
N.D.
-0.2
-0.2
-0.1
lb_0.5%bileacids_aerobic
LB_0.5%bileacids_aerobic_180MIN_ZN15B
-0.7
N.D.
+0.0
+0.1
+0.0
phage
ICP1_phage_23.5_MOI_rep1
-0.5
N.D.
+0.3
-0.2
-0.0
lb_anaerobic
LB_Anaerobic_60MIN_ZN4B
-0.3
N.D.
-0.1
-0.0
+0.0
lb_0.5%bileacids_anaerobic
LB_0.5%bileacids_Anaerobic_60MIN_ZN5B
-0.5
N.D.
-0.0
+0.1
-0.0
phage
ICP3_phage_4.1_MOI_rep1
-0.4
N.D.
+0.0
+0.1
+0.0
phage
ICP1_phage_0.23_MOI_rep2
-0.7
N.D.
+0.2
+0.0
+0.1
phage
NoPhageControl
-0.3
N.D.
+0.0
+0.0
+0.1
lb_anaerobic
LB_Anaerobic_120MIN_ZN12B
-0.2
N.D.
+0.0
+0.1
-0.1
lb_0.5%bileacids_aerobic
LB_0.5%bileacids_aerobic_18HR_ZN19B
-0.2
N.D.
+0.1
+0.1
-0.0
phage
ICP1_phage_235.3_MOI_rep2
-0.4
N.D.
+0.0
+0.2
+0.1
phage
ICP1_phage_23.5_MOI_rep2
-0.3
N.D.
+0.3
+0.0
-0.0
phage
ICP3_phage_4.1_MOI_rep2
-0.2
N.D.
-0.0
+0.1
+0.2
lb_aerobic
LB_Aerobic_180MIN_ZN14A
-0.0
N.D.
+0.1
+0.1
-0.1
lb_0.5%bileacids_anaerobic
LB_0.5%bileacids_Anaerobic_60MIN_ZN5A
-0.3
N.D.
+0.2
+0.1
+0.1
phage
ICP1_phage_235.3_MOI_rep1
+0.3
N.D.
-0.0
-0.1
-0.0
lb_anaerobic
LB_Anaerobic_180MIN_ZN16B
-0.1
N.D.
+0.2
+0.0
-0.1
lb_0.5%bileacids_anaerobic
LB_0.5%bileacids_Anaerobic_18HR_ZN21A
+0.3
N.D.
-0.0
-0.1
-0.0
phage
ICP3_phage_41.1_MOI_rep2
+0.0
N.D.
+0.1
-0.1
+0.3
lb_aerobic
LB_Aerobic_180MIN_ZN14B
+0.1
N.D.
+0.1
+0.1
+0.1
phage
ICP3_phage_41.1_MOI_rep1
+0.5
N.D.
-0.3
-0.0
+0.2
lb_aerobic
LB_Aerobic_18HR_ZN18A
+0.3
N.D.
+0.1
-0.0
-0.0
phage
ICP1_phage_0.23_MOI_rep1
+0.7
N.D.
-0.0
-0.2
+0.0
lb_0.5%bileacids_anaerobic
LB_0.5%bileacids_Anaerobic_180MIN_ZN17A
+0.3
N.D.
+0.0
+0.1
+0.1
lb_aerobic_phage
LB_Aerobic_PHAGE INFX20MPI_ZN6A
+0.5
N.D.
+0.0
-0.0
+0.1
phage
ICP3_phage_411_MOI_rep2
+0.6
N.D.
+0.1
+0.1
-0.1
phage
ICP1_phage_2.3_MOI_rep2
+0.8
N.D.
+0.4
-0.1
+0.1
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