Fitness for 5 genes in Vibrio cholerae E7946 ATCC 55056

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500 ntCSW01_10760 and CSW01_10765 are separated by 14 nucleotidesCSW01_10765 and CSW01_10770 are separated by 101 nucleotidesCSW01_10770 and CSW01_10775 are separated by 190 nucleotidesCSW01_10775 and CSW01_10780 overlap by 8 nucleotides CSW01_10760: CSW01_10760 - glycine cleavage system transcriptional regulator, at 2,306,381 to 2,306,923 _10760 CSW01_10765: CSW01_10765 - thioredoxin-dependent thiol peroxidase, at 2,306,938 to 2,307,405 _10765 CSW01_10770: CSW01_10770 - methyl-accepting chemotaxis protein, at 2,307,507 to 2,309,378 _10770 CSW01_10775: CSW01_10775 - AI-2E family transporter, at 2,309,569 to 2,310,633 _10775 CSW01_10780: CSW01_10780 - hypothetical protein, at 2,310,626 to 2,310,862 _10780
Group Condition CSW01_10760 CSW01_10765 CSW01_10770 CSW01_10775 CSW01_10780
lb_anaerobic LB_Anaerobic_18HR_ZN20A -0.3 -0.0 -0.1 -0.2 -0.1
lb_anaerobic LB_Anaerobic_120MIN_ZN12A +0.1 -0.2 -0.3 +0.1 -0.1
lb_aerobic LB_Aerobic_18HR_ZN18A +0.0 -0.1 -0.3 +0.1 -0.1
lb_0.5%bileacids_aerobic LB_0.5%bileacids_aerobic_180MIN_ZN15A -0.0 -0.4 +0.0 +0.2 -0.1
lb_0.5%bileacids_anaerobic LB_0.5%bileacids_Anaerobic_180MIN_ZN17B -0.1 -0.1 -0.0 +0.3 -0.4
lb_0.5%bileacids_anaerobic LB_0.5%bileacids_Anaerobic_60MIN_ZN5B +0.0 -0.2 -0.2 +0.2 -0.0
lb_0.5%bileacids_anaerobic LB_0.5%bileacids_Anaerobic_60MIN_ZN5A -0.0 -0.1 -0.1 +0.2 -0.2
phage ICP1_phage_23.5_MOI_rep1 +0.4 -0.3 -0.0 +0.2 -0.5
phage NoPhageControl -0.2 +0.2 -0.0 -0.1 -0.1
lb_aerobic LB_Aerobic_60MIN_ZN2B -0.1 -0.0 -0.2 +0.3 -0.0
lb_aerobic LB_Aerobic_18HR_ZN18B -0.1 -0.1 -0.1 +0.3 -0.0
lb_0.5%bileacids_aerobic LB_0.5%bileacids_aerobic_180MIN_ZN15B +0.2 -0.2 -0.1 +0.1 -0.1
lb_anaerobic LB_Anaerobic_180MIN_ZN16B +0.1 +0.3 -0.2 +0.1 -0.2
lb_0.5%bileacids_anaerobic LB_0.5%bileacids_Anaerobic_120MIN_ZN13B +0.2 +0.1 -0.2 +0.1 -0.1
phage ICP3_phage_4.1_MOI_rep1 +0.5 +0.4 +0.1 +0.1 -0.7
phage ICP3_phage_41.1_MOI_rep1 +0.5 -0.0 +0.1 +0.1 -0.3
phage ICP1_phage_2.3_MOI_rep2 +0.6 +0.2 +0.2 -0.2 -0.4
lb_anaerobic LB_Anaerobic_180MIN_ZN16A +0.3 +0.2 -0.1 +0.1 -0.0
phage ICP3_phage_0.41_MOI_rep2 +0.3 -0.1 +0.1 -0.3 +0.5
phage ICP3_phage_0.41_MOI_rep1 +0.3 +0.4 +0.3 -0.1 +0.1
phage ICP3_phage_41.1_MOI_rep2 +0.1 +0.4 +0.2 +0.1 +0.2
phage ICP3_phage_411_MOI_rep2 +0.3 -0.1 +0.4 +0.1 +0.4
phage ICP1_phage_2.3_MOI_rep1 +0.4 +0.5 +0.3 +0.0 -0.2
phage ICP1_phage_235.3_MOI_rep2 +0.1 +0.6 +0.4 +0.1 +0.0
phage ICP1_phage_0.23_MOI_rep2 +0.4 +0.3 +0.2 -0.0 +0.3
phage ICP1_phage_0.23_MOI_rep1 +0.6 +0.3 +0.3 -0.3 +0.4
phage ICP3_phage_411_MOI_rep1 +0.7 -0.3 +0.5 +0.1 +0.3
phage ICP1_phage_235.3_MOI_rep1 +0.6 +0.2 +0.4 +0.1 +0.1
phage ICP3_phage_4.1_MOI_rep2 +0.6 +0.5 +0.3 -0.1 +0.0
phage ICP1_phage_23.5_MOI_rep2 +0.5 +0.4 +0.5 +0.1 +0.2
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