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Fitness for 5 genes in
Vibrio cholerae E7946 ATCC 55056
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
CSW01_10510 and CSW01_10515 are separated by 365 nucleotides
CSW01_10515 and CSW01_10520 are separated by 81 nucleotides
CSW01_10520 and CSW01_10525 overlap by 17 nucleotides
CSW01_10525 and CSW01_10530 are separated by 185 nucleotides
CSW01_10510: CSW01_10510 - DUF4442 domain-containing protein, at 2,261,174 to 2,261,674
_10510
CSW01_10515: CSW01_10515 - transcriptional repressor, at 2,262,040 to 2,262,492
_10515
CSW01_10520: CSW01_10520 - Aspartate-semialdehyde dehydrogenase 2, at 2,262,574 to 2,263,587
_10520
CSW01_10525: CSW01_10525 - DUF3410 domain-containing protein, at 2,263,571 to 2,264,734
_10525
CSW01_10530: CSW01_10530 - beta-ketoacyl-[acyl-carrier-protein] synthase I, at 2,264,920 to 2,266,131
_10530
Group
Condition
CSW01
_10510
CSW01
_10515
CSW01
_10520
CSW01
_10525
CSW01
_10530
phage
ICP3_phage_411_MOI_rep1
-0.5
N.D.
-0.2
N.D.
N.D.
lb_0.5%bileacids_anaerobic
LB_0.5%bileacids_Anaerobic_120MIN_ZN13B
-0.4
N.D.
-0.2
N.D.
N.D.
lb_0.5%bileacids_anaerobic
LB_0.5%bileacids_Anaerobic_180MIN_ZN17A
-0.3
N.D.
-0.3
N.D.
N.D.
lb_0.5%bileacids_aerobic
LB_0.5%bileacids_aerobic_120MIN_ZN11B
-0.4
N.D.
-0.1
N.D.
N.D.
lb_0.5%bileacids_anaerobic
LB_0.5%bileacids_Anaerobic_18HR_ZN21A
-0.4
N.D.
-0.1
N.D.
N.D.
lb_anaerobic
LB_Anaerobic_120MIN_ZN12B
-0.2
N.D.
-0.2
N.D.
N.D.
lb_aerobic
LB_Aerobic_180MIN_ZN14A
-0.2
N.D.
-0.2
N.D.
N.D.
lb_0.5%bileacids_anaerobic
LB_0.5%bileacids_Anaerobic_120MIN_ZN13A
-0.2
N.D.
-0.2
N.D.
N.D.
lb_anaerobic
LB_Anaerobic_60MIN_ZN4B
-0.2
N.D.
-0.2
N.D.
N.D.
phage
ICP3_phage_0.41_MOI_rep1
-0.4
N.D.
-0.0
N.D.
N.D.
lb_0.5%bileacids_anaerobic
LB_0.5%bileacids_Anaerobic_60MIN_ZN5A
-0.5
N.D.
+0.1
N.D.
N.D.
phage
ICP1_phage_23.5_MOI_rep2
-0.5
N.D.
+0.2
N.D.
N.D.
lb_anaerobic
LB_Anaerobic_18HR_ZN20B
-0.2
N.D.
-0.1
N.D.
N.D.
lb_aerobic
LB_Aerobic_60MIN_ZN2B
-0.2
N.D.
-0.1
N.D.
N.D.
lb_aerobic
LB_Aerobic_180MIN_ZN14B
-0.2
N.D.
-0.1
N.D.
N.D.
phage
ICP1_phage_235.3_MOI_rep1
-0.3
N.D.
-0.0
N.D.
N.D.
phage
ICP1_phage_2.3_MOI_rep1
-0.0
N.D.
-0.3
N.D.
N.D.
phage
ICP3_phage_41.1_MOI_rep2
-0.3
N.D.
+0.0
N.D.
N.D.
lb_aerobic
LB_Aerobic_18HR_ZN18B
-0.1
N.D.
-0.2
N.D.
N.D.
phage
ICP3_phage_0.41_MOI_rep2
-0.3
N.D.
+0.0
N.D.
N.D.
lb_0.5%bileacids_aerobic
LB_0.5%bileacids_aerobic_18HR_ZN19B
+0.1
N.D.
-0.1
N.D.
N.D.
lb_0.5%bileacids_anaerobic
LB_0.5%bileacids_Anaerobic_60MIN_ZN5B
+0.2
N.D.
-0.2
N.D.
N.D.
lb_0.5%bileacids_aerobic
LB_0.5%bileacids_aerobic_180MIN_ZN15A
+0.2
N.D.
-0.2
N.D.
N.D.
phage
ICP1_phage_0.23_MOI_rep2
-0.0
N.D.
+0.2
N.D.
N.D.
phage
NoPhageControl
+0.4
N.D.
-0.0
N.D.
N.D.
lb_anaerobic
LB_Anaerobic_18HR_ZN20A
+0.3
N.D.
+0.1
N.D.
N.D.
phage
ICP1_phage_0.23_MOI_rep1
+0.5
N.D.
-0.2
N.D.
N.D.
phage
ICP1_phage_23.5_MOI_rep1
+0.2
N.D.
+0.2
N.D.
N.D.
phage
ICP1_phage_235.3_MOI_rep2
+0.3
N.D.
+0.2
N.D.
N.D.
phage
ICP3_phage_4.1_MOI_rep1
+0.5
N.D.
+0.1
N.D.
N.D.
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