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Fitness for 5 genes in
Vibrio cholerae E7946 ATCC 55056
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
CSW01_10415 and CSW01_10420 overlap by 1 nucleotides
CSW01_10420 and CSW01_10425 are separated by 167 nucleotides
CSW01_10425 and CSW01_10430 are separated by 28 nucleotides
CSW01_10430 and CSW01_10435 are separated by 88 nucleotides
CSW01_10415: CSW01_10415 - succinate--CoA ligase subunit alpha, at 2,241,967 to 2,242,839
_10415
CSW01_10420: CSW01_10420 - succinyl-CoA ligase subunit beta, at 2,242,839 to 2,244,005
_10420
CSW01_10425: CSW01_10425 - dihydrolipoyllysine-residue succinyltransferase, at 2,244,173 to 2,245,387
_10425
CSW01_10430: CSW01_10430 - 2-oxoglutarate dehydrogenase subunit E1, at 2,245,416 to 2,248,226
_10430
CSW01_10435: CSW01_10435 - succinate dehydrogenase iron-sulfur subunit, at 2,248,315 to 2,249,025
_10435
Group
Condition
CSW01
_10415
CSW01
_10420
CSW01
_10425
CSW01
_10430
CSW01
_10435
phage
ICP1_phage_2.3_MOI_rep1
-0.9
-1.0
N.D.
N.D.
N.D.
phage
ICP1_phage_23.5_MOI_rep2
-1.3
-0.6
N.D.
N.D.
N.D.
phage
ICP3_phage_411_MOI_rep2
-1.0
-0.8
N.D.
N.D.
N.D.
phage
ICP1_phage_235.3_MOI_rep2
-0.9
-0.7
N.D.
N.D.
N.D.
phage
ICP1_phage_2.3_MOI_rep2
-1.0
-0.5
N.D.
N.D.
N.D.
phage
ICP3_phage_4.1_MOI_rep1
-0.4
-1.1
N.D.
N.D.
N.D.
phage
ICP3_phage_0.41_MOI_rep1
-1.1
-0.4
N.D.
N.D.
N.D.
phage
ICP3_phage_411_MOI_rep1
-0.9
-0.5
N.D.
N.D.
N.D.
lb_0.5%bileacids_aerobic
LB_0.5%bileacids_aerobic_18HR_ZN19B
-0.6
-0.7
N.D.
N.D.
N.D.
phage
ICP3_phage_41.1_MOI_rep1
-0.6
-0.7
N.D.
N.D.
N.D.
phage
ICP1_phage_0.23_MOI_rep2
-0.6
-0.7
N.D.
N.D.
N.D.
phage
ICP3_phage_0.41_MOI_rep2
-0.3
-0.9
N.D.
N.D.
N.D.
lb_aerobic
LB_Aerobic_18HR_ZN18B
-0.5
-0.6
N.D.
N.D.
N.D.
lb_0.5%bileacids_aerobic
LB_0.5%bileacids_aerobic_18HR_ZN19A
-0.4
-0.6
N.D.
N.D.
N.D.
phage
ICP1_phage_0.23_MOI_rep1
-0.6
-0.3
N.D.
N.D.
N.D.
lb_0.5%bileacids_aerobic
LB_0.5%bileacids_aerobic_180MIN_ZN15A
-0.3
-0.6
N.D.
N.D.
N.D.
phage
ICP3_phage_41.1_MOI_rep2
-0.3
-0.5
N.D.
N.D.
N.D.
phage
ICP1_phage_23.5_MOI_rep1
-0.1
-0.6
N.D.
N.D.
N.D.
phage
ICP1_phage_235.3_MOI_rep1
-0.3
-0.4
N.D.
N.D.
N.D.
phage
NoPhageControl
-0.4
-0.2
N.D.
N.D.
N.D.
lb_anaerobic
LB_Anaerobic_18HR_ZN20A
-0.2
-0.4
N.D.
N.D.
N.D.
lb_aerobic
LB_Aerobic_180MIN_ZN14B
-0.3
-0.4
N.D.
N.D.
N.D.
lb_aerobic
LB_Aerobic_60MIN_ZN2B
-0.3
-0.3
N.D.
N.D.
N.D.
phage
NoPhageControl
-0.4
-0.2
N.D.
N.D.
N.D.
lb_aerobic_phage
LB_Aerobic_PHAGE INFX20MPI_ZN6A
-0.1
-0.5
N.D.
N.D.
N.D.
lb_aerobic
LB_Aerobic_180MIN_ZN14A
-0.1
-0.4
N.D.
N.D.
N.D.
lb_0.5%bileacids_aerobic
LB_0.5%bileacids_aerobic_180MIN_ZN15B
-0.1
-0.4
N.D.
N.D.
N.D.
phage
ICP3_phage_4.1_MOI_rep2
+0.0
-0.5
N.D.
N.D.
N.D.
lb_anaerobic
LB_Anaerobic_120MIN_ZN12B
-0.2
-0.2
N.D.
N.D.
N.D.
lb_anaerobic
LB_Anaerobic_180MIN_ZN16B
+0.2
-0.3
N.D.
N.D.
N.D.
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