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Fitness for 5 genes in
Vibrio cholerae E7946 ATCC 55056
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
CSW01_10390 and CSW01_10395 are separated by 771 nucleotides
CSW01_10395 and CSW01_10400 are separated by 181 nucleotides
CSW01_10400 and CSW01_10405 are separated by 74 nucleotides
CSW01_10405 and CSW01_10410 overlap by 8 nucleotides
CSW01_10390: CSW01_10390 - ferrous iron transport protein A, at 2,234,780 to 2,235,010
_10390
CSW01_10395: CSW01_10395 - AraC family transcriptional regulator, at 2,235,782 to 2,239,147
_10395
CSW01_10400: CSW01_10400 - zinc ABC transporter substrate-binding protein, at 2,239,329 to 2,240,222
_10400
CSW01_10405: CSW01_10405 - Mn2+/Zn2+ABC transporter ATP-binding protein, at 2,240,297 to 2,241,085
_10405
CSW01_10410: CSW01_10410 - zinc ABC transporter permease, at 2,241,078 to 2,241,860
_10410
Group
Condition
CSW01
_10390
CSW01
_10395
CSW01
_10400
CSW01
_10405
CSW01
_10410
lb_aerobic
LB_Aerobic_18HR_ZN18A
-1.1
-0.2
-0.6
-0.3
-0.1
lb_0.5%bileacids_anaerobic
LB_0.5%bileacids_Anaerobic_60MIN_ZN5A
-0.9
-0.1
-0.7
-0.3
-0.0
phage
ICP3_phage_4.1_MOI_rep1
-0.1
-0.1
-0.2
-0.6
-0.8
lb_0.5%bileacids_anaerobic
LB_0.5%bileacids_Anaerobic_180MIN_ZN17B
-1.3
+0.0
-0.4
-0.1
-0.1
lb_0.5%bileacids_aerobic
LB_0.5%bileacids_aerobic_120MIN_ZN11B
-0.3
-0.2
-0.4
-0.5
-0.3
lb_aerobic
LB_Aerobic_18HR_ZN18B
-0.2
-0.1
-0.6
-0.4
-0.3
phage
ICP3_phage_411_MOI_rep2
+0.2
-0.1
-0.8
-0.9
-0.1
lb_0.5%bileacids_aerobic
LB_0.5%bileacids_aerobic_18HR_ZN19A
-0.3
-0.2
-0.4
-0.4
-0.3
phage
ICP3_phage_0.41_MOI_rep1
+0.2
-0.2
-0.3
-0.4
-0.9
lb_anaerobic
LB_Anaerobic_18HR_ZN20B
-1.0
-0.1
-0.3
-0.1
+0.0
lb_anaerobic
LB_Anaerobic_60MIN_ZN4B
-0.5
-0.2
-0.8
+0.1
-0.0
lb_anaerobic
LB_Anaerobic_120MIN_ZN12B
-0.9
-0.1
-0.2
-0.3
+0.2
lb_0.5%bileacids_aerobic
LB_0.5%bileacids_aerobic_18HR_ZN19B
-0.5
-0.1
-0.3
-0.2
-0.2
lb_aerobic_phage
LB_Aerobic_PHAGE INFX20MPI_ZN6A
-0.7
-0.1
-0.3
-0.4
+0.1
lb_0.5%bileacids_anaerobic
LB_0.5%bileacids_Anaerobic_18HR_ZN21A
-1.2
-0.0
-0.1
+0.1
+0.0
lb_0.5%bileacids_anaerobic
LB_0.5%bileacids_Anaerobic_120MIN_ZN13A
-0.8
-0.2
-0.3
-0.1
+0.2
lb_0.5%bileacids_aerobic
LB_0.5%bileacids_aerobic_180MIN_ZN15B
-0.5
-0.2
-0.3
-0.1
+0.2
lb_0.5%bileacids_anaerobic
LB_0.5%bileacids_Anaerobic_60MIN_ZN5B
-0.9
-0.2
+0.1
-0.2
+0.1
lb_anaerobic
LB_Anaerobic_180MIN_ZN16A
-0.4
-0.2
-0.4
-0.2
+0.2
phage
ICP1_phage_23.5_MOI_rep2
+0.9
-0.0
-1.1
-0.4
-0.2
phage
ICP3_phage_4.1_MOI_rep2
+0.7
+0.0
-0.5
-0.6
-0.3
phage
ICP1_phage_23.5_MOI_rep1
+0.1
+0.3
-0.1
-0.5
-0.5
phage
ICP1_phage_235.3_MOI_rep2
+0.8
-0.0
-0.3
-0.4
-0.7
phage
ICP1_phage_2.3_MOI_rep1
+0.4
-0.1
+0.1
-0.3
-0.7
phage
ICP1_phage_235.3_MOI_rep1
+0.6
-0.1
-0.5
-0.3
-0.1
phage
ICP3_phage_411_MOI_rep1
+0.8
-0.1
-0.3
-0.6
-0.2
phage
ICP3_phage_0.41_MOI_rep2
+0.6
+0.0
-0.1
-0.5
-0.3
phage
ICP1_phage_2.3_MOI_rep2
+0.6
+0.1
-0.4
-0.5
+0.0
phage
ICP3_phage_41.1_MOI_rep1
+1.0
+0.2
+0.3
-0.9
-0.6
phage
ICP1_phage_0.23_MOI_rep1
+1.8
-0.1
-0.6
-0.4
-0.0
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