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Protein
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Fitness for 5 genes in
Vibrio cholerae E7946 ATCC 55056
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
CSW01_10320 and CSW01_10325 are separated by 9 nucleotides
CSW01_10325 and CSW01_10330 are separated by 55 nucleotides
CSW01_10330 and CSW01_10335 are separated by 45 nucleotides
CSW01_10335 and CSW01_10340 overlap by 8 nucleotides
CSW01_10320: CSW01_10320 - chemotaxis protein CheA, at 2,216,391 to 2,218,748
_10320
CSW01_10325: CSW01_10325 - protein phosphatase CheZ, at 2,218,758 to 2,219,477
_10325
CSW01_10330: CSW01_10330 - chemotaxis protein CheY, at 2,219,533 to 2,219,901
_10330
CSW01_10335: CSW01_10335 - RNA polymerase sigma factor FliA, at 2,219,947 to 2,220,681
_10335
CSW01_10340: CSW01_10340 - MinD/ParA family protein, at 2,220,674 to 2,221,615
_10340
Group
Condition
CSW01
_10320
CSW01
_10325
CSW01
_10330
CSW01
_10335
CSW01
_10340
lb_anaerobic
LB_Anaerobic_18HR_ZN20A
+0.0
+0.0
-0.2
+0.4
-3.8
lb_0.5%bileacids_aerobic
LB_0.5%bileacids_aerobic_18HR_ZN19B
-0.0
-0.0
-0.1
+0.5
-3.2
phage
ICP1_phage_235.3_MOI_rep1
+0.2
+0.7
-0.2
-0.0
-2.8
phage
ICP3_phage_4.1_MOI_rep1
+0.3
+0.3
+0.3
-0.1
-2.7
phage
ICP3_phage_41.1_MOI_rep1
+0.3
+0.7
-0.8
-0.1
-1.2
phage
ICP1_phage_23.5_MOI_rep2
-0.0
+0.7
-0.0
-0.1
-1.6
phage
ICP3_phage_0.41_MOI_rep2
+0.2
+0.6
-0.1
+0.3
-1.8
phage
ICP3_phage_411_MOI_rep2
+0.2
+0.7
-0.2
+0.1
-1.7
phage
ICP1_phage_2.3_MOI_rep1
+0.3
+0.1
-0.4
+0.0
-0.9
phage
ICP1_phage_235.3_MOI_rep2
+0.1
+0.5
+0.6
-0.5
-1.4
lb_aerobic
LB_Aerobic_18HR_ZN18B
-0.0
-0.1
-0.1
+0.7
-1.0
phage
ICP3_phage_411_MOI_rep1
+0.2
+0.7
+0.1
-0.4
-1.2
lb_0.5%bileacids_aerobic
LB_0.5%bileacids_aerobic_18HR_ZN19A
+0.0
+0.1
-0.3
+0.6
-0.8
phage
ICP3_phage_4.1_MOI_rep2
+0.5
+0.6
-0.1
-0.3
-1.0
phage
ICP1_phage_2.3_MOI_rep2
+0.1
+0.9
+0.2
-0.1
-1.3
phage
ICP1_phage_23.5_MOI_rep1
+0.3
+0.5
+0.1
-0.1
-0.9
phage
ICP1_phage_0.23_MOI_rep2
+0.3
+0.3
+0.2
+0.1
-1.0
lb_0.5%bileacids_aerobic
LB_0.5%bileacids_aerobic_120MIN_ZN11A
-0.3
-0.2
-0.4
+0.8
+0.2
phage
ICP3_phage_0.41_MOI_rep1
+0.2
+0.6
+0.1
+0.0
-0.7
phage
ICP3_phage_41.1_MOI_rep2
+0.2
+0.9
+0.1
+0.3
-1.1
lb_anaerobic
LB_Anaerobic_18HR_ZN20B
-0.2
-0.0
-0.3
+1.0
-0.0
lb_aerobic_phage
LB_Aerobic_PHAGE INFX20MPI_ZN6A
+0.2
-0.0
-0.0
+0.9
-0.5
phage
ICP1_phage_0.23_MOI_rep1
+0.4
+0.7
-0.1
+0.3
-0.6
lb_0.5%bileacids_anaerobic
LB_0.5%bileacids_Anaerobic_18HR_ZN21A
-0.2
-0.1
-0.3
+1.1
+0.0
lb_aerobic
LB_Aerobic_18HR_ZN18A
+0.1
-0.2
+0.0
+1.3
-0.1
lb_0.5%bileacids_anaerobic
LB_0.5%bileacids_Anaerobic_180MIN_ZN17B
+0.1
-0.2
-0.2
+1.4
-0.1
lb_anaerobic
LB_Anaerobic_60MIN_ZN4B
-0.1
-0.0
+0.0
+0.6
+1.1
lb_0.5%bileacids_anaerobic
LB_0.5%bileacids_Anaerobic_120MIN_ZN13A
+0.1
-0.1
+0.2
+0.9
+0.5
lb_0.5%bileacids_anaerobic
LB_0.5%bileacids_Anaerobic_60MIN_ZN5B
+0.2
+0.1
-0.0
+1.0
+0.4
lb_aerobic
LB_Aerobic_180MIN_ZN14A
+0.2
-0.1
+0.3
+0.9
+0.5
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