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Fitness for 5 genes in
Vibrio cholerae E7946 ATCC 55056
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500 nt
CSW01_10245 and CSW01_10250 are separated by 52 nucleotides
CSW01_10250 and CSW01_10255 are separated by 2 nucleotides
CSW01_10255 and CSW01_10260 overlap by 4 nucleotides
CSW01_10260 and CSW01_10265 are separated by 0 nucleotides
CSW01_10245: CSW01_10245 - ABC transporter, at 2,204,220 to 2,204,984
_10245
CSW01_10250: CSW01_10250 - c-type cytochrome biogenesis protein CcmI, at 2,205,037 to 2,206,251
_10250
CSW01_10255: CSW01_10255 - cytochrome c-type biogenesis protein CcmH, at 2,206,254 to 2,206,730
_10255
CSW01_10260: CSW01_10260 - thiol:disulfide interchange protein DsbE, at 2,206,727 to 2,207,281
_10260
CSW01_10265: CSW01_10265 - c-type cytochrome biogenesis protein CcmF, at 2,207,282 to 2,209,237
_10265
Group
Condition
CSW01
_10245
CSW01
_10250
CSW01
_10255
CSW01
_10260
CSW01
_10265
phage
ICP1_phage_235.3_MOI_rep1
-0.4
+0.1
-4.2
-2.9
-2.0
phage
ICP3_phage_0.41_MOI_rep2
+0.3
-0.3
-4.6
-2.2
-2.0
phage
ICP1_phage_23.5_MOI_rep1
-0.6
-0.2
-4.5
-1.6
-1.7
phage
ICP3_phage_4.1_MOI_rep2
-0.9
-0.3
-3.7
-1.6
-1.8
phage
ICP1_phage_0.23_MOI_rep1
-0.8
-0.2
-4.4
-1.8
-1.0
phage
ICP3_phage_41.1_MOI_rep2
-0.5
-0.2
-2.6
-2.4
-2.0
phage
ICP1_phage_2.3_MOI_rep1
-0.4
-0.6
-1.9
-2.1
-2.6
phage
ICP3_phage_0.41_MOI_rep1
-0.4
-0.5
-1.1
-3.3
-2.1
phage
ICP3_phage_411_MOI_rep1
+0.4
-0.1
-3.0
-2.3
-1.9
phage
ICP3_phage_4.1_MOI_rep1
-0.5
-0.3
-2.6
-1.2
-2.4
phage
ICP1_phage_23.5_MOI_rep2
+0.0
-0.3
-1.3
-2.2
-1.8
phage
ICP3_phage_41.1_MOI_rep1
-0.3
-0.4
-0.4
-2.1
-2.2
phage
ICP3_phage_411_MOI_rep2
-1.1
-0.3
-1.1
-1.4
-1.4
phage
ICP1_phage_235.3_MOI_rep2
+0.1
-0.4
-2.0
-1.0
-1.4
phage
ICP1_phage_2.3_MOI_rep2
-0.4
-0.1
-0.7
-2.1
-0.9
phage
ICP1_phage_0.23_MOI_rep2
+0.3
-0.4
-1.0
-0.4
-2.0
phage
NoPhageControl
-0.4
-0.2
-1.0
-0.3
-0.7
lb_0.5%bileacids_anaerobic
LB_0.5%bileacids_Anaerobic_180MIN_ZN17B
-1.6
+0.0
-0.9
+0.0
+0.0
phage
NoPhageControl
-0.2
-0.4
-0.5
-0.7
-0.6
lb_0.5%bileacids_aerobic
LB_0.5%bileacids_aerobic_120MIN_ZN11B
-0.6
+0.0
-0.7
-0.9
-0.0
lb_aerobic_phage
LB_Aerobic_PHAGE INFX20MPI_ZN6A
-0.5
+0.1
-1.0
-0.6
-0.2
lb_0.5%bileacids_aerobic
LB_0.5%bileacids_aerobic_18HR_ZN19B
-0.5
+0.0
-0.2
-0.8
-0.4
lb_aerobic
LB_Aerobic_18HR_ZN18B
+0.0
-0.1
-0.1
-0.8
-0.3
lb_0.5%bileacids_aerobic
LB_0.5%bileacids_aerobic_18HR_ZN19A
-0.1
+0.0
-0.8
-0.5
+0.1
lb_0.5%bileacids_aerobic
LB_0.5%bileacids_aerobic_180MIN_ZN15B
-0.7
-0.1
+0.0
-0.6
+0.2
lb_anaerobic
LB_Anaerobic_18HR_ZN20A
-0.8
+0.0
+0.6
-0.6
-0.3
lb_aerobic
LB_Aerobic_18HR_ZN18A
-1.6
-0.0
+0.4
+0.2
+0.1
lb_0.5%bileacids_anaerobic
LB_0.5%bileacids_Anaerobic_120MIN_ZN13B
-0.2
+0.1
+0.2
-0.6
-0.4
lb_anaerobic
LB_Anaerobic_60MIN_ZN4B
-0.8
-0.0
+1.1
-0.2
-0.1
lb_0.5%bileacids_anaerobic
LB_0.5%bileacids_Anaerobic_60MIN_ZN5B
-0.2
+0.1
+0.5
+0.2
+0.3
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