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Fitness for 5 genes in
Vibrio cholerae E7946 ATCC 55056
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
CSW01_10230 and CSW01_10235 are separated by 81 nucleotides
CSW01_10235 and CSW01_10240 are separated by 368 nucleotides
CSW01_10240 and CSW01_10245 are separated by 12 nucleotides
CSW01_10245 and CSW01_10250 are separated by 52 nucleotides
CSW01_10230: CSW01_10230 - superoxide dismutase [Fe], at 2,201,956 to 2,202,540
_10230
CSW01_10235: CSW01_10235 - hypothetical protein, at 2,202,622 to 2,203,158
_10235
CSW01_10240: CSW01_10240 - short-chain dehydrogenase, at 2,203,527 to 2,204,207
_10240
CSW01_10245: CSW01_10245 - ABC transporter, at 2,204,220 to 2,204,984
_10245
CSW01_10250: CSW01_10250 - c-type cytochrome biogenesis protein CcmI, at 2,205,037 to 2,206,251
_10250
Group
Condition
CSW01
_10230
CSW01
_10235
CSW01
_10240
CSW01
_10245
CSW01
_10250
phage
ICP3_phage_41.1_MOI_rep1
N.D.
-0.6
-0.9
-0.3
-0.4
phage
ICP3_phage_411_MOI_rep2
N.D.
-0.4
-0.2
-1.1
-0.3
phage
ICP1_phage_23.5_MOI_rep1
N.D.
-0.7
-0.1
-0.6
-0.2
lb_aerobic
LB_Aerobic_18HR_ZN18A
N.D.
+0.5
-0.2
-1.6
-0.0
phage
ICP1_phage_2.3_MOI_rep1
N.D.
-0.3
-0.1
-0.4
-0.6
phage
ICP3_phage_4.1_MOI_rep2
N.D.
+0.1
-0.0
-0.9
-0.3
phage
ICP3_phage_0.41_MOI_rep1
N.D.
-0.3
+0.1
-0.4
-0.5
phage
ICP1_phage_0.23_MOI_rep2
N.D.
-0.6
-0.3
+0.3
-0.4
phage
NoPhageControl
N.D.
-0.3
-0.1
-0.2
-0.4
lb_anaerobic
LB_Anaerobic_60MIN_ZN4B
N.D.
+0.4
-0.3
-0.8
-0.0
phage
ICP1_phage_0.23_MOI_rep1
N.D.
+0.5
-0.2
-0.8
-0.2
lb_0.5%bileacids_aerobic
LB_0.5%bileacids_aerobic_180MIN_ZN15B
N.D.
+0.3
-0.2
-0.7
-0.1
phage
ICP1_phage_235.3_MOI_rep1
N.D.
-0.0
-0.4
-0.4
+0.1
lb_0.5%bileacids_anaerobic
LB_0.5%bileacids_Anaerobic_180MIN_ZN17B
N.D.
+1.1
-0.2
-1.6
+0.0
lb_aerobic
LB_Aerobic_120MIN_ZN10B
N.D.
+0.3
-0.0
-0.6
-0.0
phage
ICP3_phage_41.1_MOI_rep2
N.D.
+0.5
-0.1
-0.5
-0.2
lb_0.5%bileacids_aerobic
LB_0.5%bileacids_aerobic_120MIN_ZN11A
N.D.
+0.4
-0.1
-0.5
+0.0
lb_anaerobic
LB_Anaerobic_18HR_ZN20A
N.D.
+0.8
+0.1
-0.8
+0.0
lb_aerobic
LB_Aerobic_180MIN_ZN14A
N.D.
+0.5
+0.1
-0.5
-0.0
lb_0.5%bileacids_anaerobic
LB_0.5%bileacids_Anaerobic_120MIN_ZN13B
N.D.
+0.4
-0.2
-0.2
+0.1
lb_aerobic_phage
LB_Aerobic_PHAGE INFX20MPI_ZN6A
N.D.
+0.5
+0.0
-0.5
+0.1
lb_anaerobic
LB_Anaerobic_180MIN_ZN16B
N.D.
+0.6
-0.2
-0.2
+0.0
lb_0.5%bileacids_aerobic
LB_0.5%bileacids_aerobic_18HR_ZN19B
N.D.
+0.6
+0.1
-0.5
+0.0
phage
ICP1_phage_235.3_MOI_rep2
N.D.
+0.4
+0.2
+0.1
-0.4
lb_0.5%bileacids_anaerobic
LB_0.5%bileacids_Anaerobic_60MIN_ZN5B
N.D.
+0.5
-0.1
-0.2
+0.1
lb_0.5%bileacids_anaerobic
LB_0.5%bileacids_Anaerobic_180MIN_ZN17A
N.D.
+0.6
+0.1
-0.3
-0.1
lb_anaerobic
LB_Anaerobic_18HR_ZN20B
N.D.
+0.5
-0.1
+0.2
-0.1
phage
ICP3_phage_0.41_MOI_rep2
N.D.
+1.0
-0.4
+0.3
-0.3
phage
ICP3_phage_4.1_MOI_rep1
N.D.
+0.9
+0.5
-0.5
-0.3
phage
ICP3_phage_411_MOI_rep1
N.D.
+0.5
+0.0
+0.4
-0.1
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