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Protein
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Fitness for 5 genes in
Vibrio cholerae E7946 ATCC 55056
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
CSW01_10185 and CSW01_10190 are separated by 162 nucleotides
CSW01_10190 and CSW01_10195 are separated by 84 nucleotides
CSW01_10195 and CSW01_10200 are separated by 34 nucleotides
CSW01_10200 and CSW01_10205 are separated by 63 nucleotides
CSW01_10185: CSW01_10185 - histidine kinase, at 2,193,439 to 2,194,644
_10185
CSW01_10190: CSW01_10190 - nucleoid-associated protein, at 2,194,807 to 2,195,808
_10190
CSW01_10195: CSW01_10195 - hypothetical protein, at 2,195,893 to 2,196,108
_10195
CSW01_10200: CSW01_10200 - DUF3413 domain-containing protein, at 2,196,143 to 2,197,945
_10200
CSW01_10205: CSW01_10205 - tRNA-Pro, at 2,198,009 to 2,198,085
_10205
Group
Condition
CSW01
_10185
CSW01
_10190
CSW01
_10195
CSW01
_10200
CSW01
_10205
phage
ICP3_phage_41.1_MOI_rep1
+0.0
-0.3
-2.2
-0.3
N.D.
lb_aerobic
LB_Aerobic_18HR_ZN18B
-0.1
-2.8
-0.2
+0.3
N.D.
lb_aerobic
LB_Aerobic_180MIN_ZN14B
+0.0
-2.2
-0.3
-0.2
N.D.
phage
ICP1_phage_2.3_MOI_rep2
-0.2
-0.5
-1.7
-0.3
N.D.
lb_0.5%bileacids_aerobic
LB_0.5%bileacids_aerobic_180MIN_ZN15A
-0.0
-2.5
+0.1
-0.0
N.D.
lb_0.5%bileacids_aerobic
LB_0.5%bileacids_aerobic_180MIN_ZN15B
+0.0
-1.5
-0.8
-0.2
N.D.
lb_0.5%bileacids_aerobic
LB_0.5%bileacids_aerobic_18HR_ZN19B
-0.1
-2.5
+0.1
+0.0
N.D.
lb_0.5%bileacids_aerobic
LB_0.5%bileacids_aerobic_120MIN_ZN11A
-0.1
-1.3
-0.6
-0.2
N.D.
lb_anaerobic
LB_Anaerobic_18HR_ZN20B
-0.0
-1.6
-0.3
-0.2
N.D.
lb_0.5%bileacids_aerobic
LB_0.5%bileacids_aerobic_18HR_ZN19A
-0.1
-2.1
-0.2
+0.3
N.D.
lb_0.5%bileacids_anaerobic
LB_0.5%bileacids_Anaerobic_18HR_ZN21A
-0.0
-1.9
+0.0
-0.1
N.D.
lb_anaerobic
LB_Anaerobic_18HR_ZN20A
-0.0
-1.8
-0.0
-0.1
N.D.
lb_0.5%bileacids_aerobic
LB_0.5%bileacids_aerobic_120MIN_ZN11B
-0.2
-1.1
-0.3
-0.3
N.D.
lb_anaerobic
LB_Anaerobic_180MIN_ZN16A
-0.0
-1.3
-0.3
-0.1
N.D.
lb_anaerobic
LB_Anaerobic_120MIN_ZN12A
-0.1
-1.2
-0.4
-0.1
N.D.
phage
ICP3_phage_41.1_MOI_rep2
+0.2
-0.9
-1.0
+0.0
N.D.
lb_anaerobic
LB_Anaerobic_180MIN_ZN16B
+0.1
-1.1
-0.4
-0.1
N.D.
phage
ICP3_phage_411_MOI_rep2
+0.3
-1.0
-0.5
-0.3
N.D.
phage
ICP1_phage_235.3_MOI_rep1
+0.3
-0.4
-1.3
-0.0
N.D.
lb_aerobic
LB_Aerobic_60MIN_ZN2B
-0.2
-0.9
-0.1
-0.3
N.D.
lb_anaerobic
LB_Anaerobic_120MIN_ZN12B
+0.0
-1.1
-0.2
-0.1
N.D.
lb_0.5%bileacids_anaerobic
LB_0.5%bileacids_Anaerobic_180MIN_ZN17B
-0.0
-1.3
-0.2
+0.1
N.D.
phage
NoPhageControl
-0.1
-0.9
-0.2
-0.2
N.D.
phage
ICP3_phage_0.41_MOI_rep2
+0.1
-0.3
-0.8
-0.4
N.D.
phage
ICP3_phage_411_MOI_rep1
+0.1
-0.4
-0.7
-0.3
N.D.
lb_0.5%bileacids_anaerobic
LB_0.5%bileacids_Anaerobic_120MIN_ZN13A
-0.1
-1.4
+0.2
-0.0
N.D.
phage
ICP3_phage_4.1_MOI_rep2
+0.4
-0.4
-0.6
-0.4
N.D.
lb_aerobic
LB_Aerobic_18HR_ZN18A
+0.1
-1.2
+0.3
-0.1
N.D.
lb_0.5%bileacids_anaerobic
LB_0.5%bileacids_Anaerobic_180MIN_ZN17A
-0.1
-1.1
+0.3
-0.0
N.D.
phage
NoPhageControl
-0.1
-0.9
+0.3
-0.1
N.D.
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