Fitness for 5 genes in Vibrio cholerae E7946 ATCC 55056

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500 ntCSW01_10070 and CSW01_10075 overlap by 4 nucleotidesCSW01_10075 and CSW01_10080 overlap by 4 nucleotidesCSW01_10080 and CSW01_10085 are separated by 77 nucleotidesCSW01_10085 and CSW01_10090 are separated by 88 nucleotides CSW01_10070: CSW01_10070 - thymidylate kinase, at 2,169,011 to 2,169,649 _10070 CSW01_10075: CSW01_10075 - endolytic transglycosylase MltG, at 2,169,646 to 2,170,662 _10075 CSW01_10080: CSW01_10080 - 4-amino-4-deoxychorismate lyase, at 2,170,659 to 2,171,462 _10080 CSW01_10085: CSW01_10085 - beta-ketoacyl-[acyl-carrier-protein] synthase II, at 2,171,540 to 2,172,784 _10085 CSW01_10090: CSW01_10090 - acyl carrier protein, at 2,172,873 to 2,173,109 _10090
Group Condition CSW01_10070 CSW01_10075 CSW01_10080 CSW01_10085 CSW01_10090
phage ICP3_phage_41.1_MOI_rep2 N.D. -0.9 -0.4 -0.1 N.D.
phage ICP1_phage_0.23_MOI_rep1 N.D. -0.6 -1.2 +0.8 N.D.
phage ICP3_phage_41.1_MOI_rep1 N.D. -0.9 -0.3 +0.5 N.D.
phage ICP3_phage_411_MOI_rep1 N.D. -0.8 -0.4 +0.5 N.D.
phage ICP1_phage_235.3_MOI_rep1 N.D. -0.7 -0.1 +0.4 N.D.
lb_0.5%bileacids_anaerobic LB_0.5%bileacids_Anaerobic_18HR_ZN21A N.D. -0.5 +0.2 -0.1 N.D.
phage ICP1_phage_0.23_MOI_rep2 N.D. -0.7 +0.0 +0.4 N.D.
phage ICP1_phage_23.5_MOI_rep1 N.D. -0.9 +0.0 +0.6 N.D.
phage ICP3_phage_411_MOI_rep2 N.D. -0.4 -0.2 +0.3 N.D.
lb_anaerobic LB_Anaerobic_18HR_ZN20B N.D. -0.5 +0.3 +0.1 N.D.
lb_0.5%bileacids_aerobic LB_0.5%bileacids_aerobic_18HR_ZN19B N.D. -0.5 +0.4 +0.0 N.D.
phage ICP1_phage_23.5_MOI_rep2 N.D. -0.3 -0.6 +0.8 N.D.
lb_aerobic LB_Aerobic_18HR_ZN18A N.D. -0.3 +0.5 -0.3 N.D.
lb_aerobic LB_Aerobic_18HR_ZN18B N.D. -0.4 +0.4 -0.1 N.D.
lb_anaerobic LB_Anaerobic_18HR_ZN20A N.D. -0.5 +0.3 +0.1 N.D.
phage ICP3_phage_4.1_MOI_rep2 N.D. -0.8 +0.2 +0.6 N.D.
phage ICP3_phage_0.41_MOI_rep1 N.D. -0.2 -0.2 +0.5 N.D.
phage ICP3_phage_0.41_MOI_rep2 N.D. -0.3 +0.0 +0.5 N.D.
lb_0.5%bileacids_aerobic LB_0.5%bileacids_aerobic_180MIN_ZN15A N.D. -0.4 +0.5 -0.0 N.D.
lb_aerobic LB_Aerobic_120MIN_ZN10B N.D. -0.3 +0.3 +0.2 N.D.
phage ICP1_phage_235.3_MOI_rep2 N.D. -0.5 +0.1 +0.6 N.D.
lb_0.5%bileacids_anaerobic LB_0.5%bileacids_Anaerobic_180MIN_ZN17B N.D. -0.3 +0.5 +0.1 N.D.
lb_anaerobic LB_Anaerobic_120MIN_ZN12A N.D. -0.2 +0.5 +0.0 N.D.
phage ICP1_phage_2.3_MOI_rep2 N.D. -0.6 +0.2 +0.7 N.D.
lb_anaerobic LB_Anaerobic_60MIN_ZN4B N.D. -0.2 +0.4 +0.1 N.D.
lb_aerobic LB_Aerobic_180MIN_ZN14B N.D. -0.2 +0.5 +0.1 N.D.
lb_0.5%bileacids_anaerobic LB_0.5%bileacids_Anaerobic_120MIN_ZN13A N.D. -0.2 +0.5 +0.1 N.D.
phage ICP1_phage_2.3_MOI_rep1 N.D. -0.1 -0.3 +0.9 N.D.
lb_0.5%bileacids_aerobic LB_0.5%bileacids_aerobic_120MIN_ZN11B N.D. +0.1 +0.6 -0.1 N.D.
lb_0.5%bileacids_anaerobic LB_0.5%bileacids_Anaerobic_60MIN_ZN5A N.D. +0.1 +0.5 +0.2 N.D.
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