Fitness for 5 genes in Vibrio cholerae E7946 ATCC 55056

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500 ntCSW01_10055 and CSW01_10060 are separated by 371 nucleotidesCSW01_10060 and CSW01_10065 overlap by 10 nucleotidesCSW01_10065 and CSW01_10070 overlap by 8 nucleotidesCSW01_10070 and CSW01_10075 overlap by 4 nucleotides CSW01_10055: CSW01_10055 - PTS glucose transporter subunit IIBC, at 2,165,412 to 2,166,914 _10055 CSW01_10060: CSW01_10060 - YchF/TatD family DNA exonuclease, at 2,167,286 to 2,168,053 _10060 CSW01_10065: CSW01_10065 - DNA polymerase III subunit delta', at 2,168,044 to 2,169,018 _10065 CSW01_10070: CSW01_10070 - thymidylate kinase, at 2,169,011 to 2,169,649 _10070 CSW01_10075: CSW01_10075 - endolytic transglycosylase MltG, at 2,169,646 to 2,170,662 _10075
Group Condition CSW01_10055 CSW01_10060 CSW01_10065 CSW01_10070 CSW01_10075
phage ICP3_phage_0.41_MOI_rep2 -0.3 -0.4 N.D. N.D. -0.3
phage ICP1_phage_23.5_MOI_rep1 +0.0 +0.2 N.D. N.D. -0.9
phage ICP1_phage_235.3_MOI_rep2 +0.0 -0.1 N.D. N.D. -0.5
lb_aerobic LB_Aerobic_60MIN_ZN2B -0.3 -0.1 N.D. N.D. -0.2
phage ICP3_phage_4.1_MOI_rep2 +0.1 +0.3 N.D. N.D. -0.8
phage ICP3_phage_41.1_MOI_rep1 +0.1 +0.4 N.D. N.D. -0.9
lb_aerobic LB_Aerobic_120MIN_ZN10B -0.2 +0.2 N.D. N.D. -0.3
lb_anaerobic LB_Anaerobic_18HR_ZN20A -0.1 +0.2 N.D. N.D. -0.5
lb_0.5%bileacids_anaerobic LB_0.5%bileacids_Anaerobic_18HR_ZN21A -0.1 +0.3 N.D. N.D. -0.5
lb_0.5%bileacids_aerobic LB_0.5%bileacids_aerobic_180MIN_ZN15A -0.1 +0.2 N.D. N.D. -0.4
phage ICP3_phage_41.1_MOI_rep2 -0.2 +0.8 N.D. N.D. -0.9
lb_0.5%bileacids_anaerobic LB_0.5%bileacids_Anaerobic_180MIN_ZN17B -0.2 +0.2 N.D. N.D. -0.3
phage ICP1_phage_235.3_MOI_rep1 -0.2 +0.7 N.D. N.D. -0.7
lb_anaerobic LB_Anaerobic_18HR_ZN20B -0.0 +0.3 N.D. N.D. -0.5
lb_aerobic LB_Aerobic_18HR_ZN18A -0.3 +0.3 N.D. N.D. -0.3
lb_0.5%bileacids_aerobic LB_0.5%bileacids_aerobic_180MIN_ZN15B -0.0 +0.2 N.D. N.D. -0.3
lb_0.5%bileacids_aerobic LB_0.5%bileacids_aerobic_18HR_ZN19B -0.1 +0.5 N.D. N.D. -0.5
phage ICP1_phage_2.3_MOI_rep2 -0.0 +0.5 N.D. N.D. -0.6
lb_anaerobic LB_Anaerobic_120MIN_ZN12A -0.2 +0.4 N.D. N.D. -0.2
lb_aerobic LB_Aerobic_180MIN_ZN14B -0.1 +0.3 N.D. N.D. -0.2
phage ICP1_phage_0.23_MOI_rep2 +0.7 -0.0 N.D. N.D. -0.7
lb_anaerobic LB_Anaerobic_60MIN_ZN4B -0.5 +0.7 N.D. N.D. -0.2
phage ICP1_phage_0.23_MOI_rep1 +0.6 +0.2 N.D. N.D. -0.6
phage ICP3_phage_411_MOI_rep1 +0.1 +0.9 N.D. N.D. -0.8
phage ICP3_phage_4.1_MOI_rep1 -0.0 +0.4 N.D. N.D. -0.2
lb_aerobic LB_Aerobic_18HR_ZN18B +0.3 +0.3 N.D. N.D. -0.4
lb_0.5%bileacids_anaerobic LB_0.5%bileacids_Anaerobic_120MIN_ZN13A -0.1 +0.5 N.D. N.D. -0.2
lb_0.5%bileacids_anaerobic LB_0.5%bileacids_Anaerobic_60MIN_ZN5B -0.1 +0.2 N.D. N.D. +0.3
phage ICP3_phage_411_MOI_rep2 -0.1 +1.1 N.D. N.D. -0.4
phage ICP1_phage_2.3_MOI_rep1 +0.2 +0.4 N.D. N.D. -0.1
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CSW01_10055
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CSW01_10075
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