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Fitness for 5 genes in
Vibrio cholerae E7946 ATCC 55056
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
CSW01_09830 and CSW01_09835 are separated by 87 nucleotides
CSW01_09835 and CSW01_09840 are separated by 28 nucleotides
CSW01_09840 and CSW01_09845 overlap by 25 nucleotides
CSW01_09845 and CSW01_09850 are separated by 87 nucleotides
CSW01_09830: CSW01_09830 - XRE family transcriptional regulator, at 2,118,795 to 2,119,340
_09830
CSW01_09835: CSW01_09835 - benzoate transporter, at 2,119,428 to 2,120,591
_09835
CSW01_09840: CSW01_09840 - o-succinylbenzoate--CoA ligase, at 2,120,620 to 2,122,050
_09840
CSW01_09845: CSW01_09845 - o-succinylbenzoate synthase, at 2,122,026 to 2,123,024
_09845
CSW01_09850: CSW01_09850 - 1,4-dihydroxy-2-naphthoyl-CoA synthase, at 2,123,112 to 2,123,978
_09850
Group
Condition
CSW01
_09830
CSW01
_09835
CSW01
_09840
CSW01
_09845
CSW01
_09850
lb_anaerobic
LB_Anaerobic_60MIN_ZN4B
-0.4
-0.1
-0.4
-0.3
+0.3
lb_anaerobic
LB_Anaerobic_120MIN_ZN12B
-0.0
-0.2
-0.2
-0.2
-0.0
lb_aerobic
LB_Aerobic_180MIN_ZN14A
+0.2
-0.3
-0.3
-0.3
+0.1
phage
ICP1_phage_2.3_MOI_rep2
-0.1
-0.3
-0.2
+0.1
-0.1
lb_0.5%bileacids_anaerobic
LB_0.5%bileacids_Anaerobic_60MIN_ZN5B
-0.2
+0.1
-0.4
-0.0
-0.0
phage
ICP3_phage_0.41_MOI_rep2
-0.7
+0.0
-0.1
+0.0
+0.2
lb_anaerobic
LB_Anaerobic_180MIN_ZN16B
-0.0
-0.1
-0.4
-0.1
+0.2
phage
ICP3_phage_4.1_MOI_rep2
-0.4
-0.0
+0.2
-0.0
-0.1
phage
ICP1_phage_235.3_MOI_rep2
-0.3
+0.1
+0.1
-0.3
+0.1
lb_aerobic
LB_Aerobic_60MIN_ZN2B
+0.2
-0.2
-0.2
+0.0
-0.1
lb_0.5%bileacids_anaerobic
LB_0.5%bileacids_Anaerobic_180MIN_ZN17A
+0.3
-0.1
-0.5
-0.1
+0.1
phage
ICP1_phage_0.23_MOI_rep1
+0.0
-0.3
-0.2
+0.1
+0.2
lb_0.5%bileacids_anaerobic
LB_0.5%bileacids_Anaerobic_120MIN_ZN13B
+0.3
-0.2
-0.3
-0.2
+0.2
lb_anaerobic
LB_Anaerobic_18HR_ZN20B
+0.1
-0.0
-0.3
-0.1
+0.1
phage
ICP1_phage_235.3_MOI_rep1
-0.5
-0.2
+0.1
+0.1
+0.3
phage
ICP1_phage_0.23_MOI_rep2
-0.2
-0.1
+0.0
+0.2
-0.0
phage
ICP1_phage_23.5_MOI_rep1
-0.7
+0.1
+0.3
+0.4
-0.1
lb_aerobic_phage
LB_Aerobic_PHAGE INFX20MPI_ZN6A
+0.2
+0.1
-0.3
-0.0
-0.0
lb_aerobic
LB_Aerobic_18HR_ZN18A
+0.3
-0.3
-0.3
+0.2
+0.1
lb_0.5%bileacids_aerobic
LB_0.5%bileacids_aerobic_180MIN_ZN15B
+0.2
+0.1
-0.1
-0.2
+0.1
lb_aerobic
LB_Aerobic_120MIN_ZN10B
+0.1
-0.1
-0.1
+0.0
+0.2
phage
ICP3_phage_0.41_MOI_rep1
-0.6
+0.4
+0.3
-0.2
+0.3
lb_0.5%bileacids_aerobic
LB_0.5%bileacids_aerobic_180MIN_ZN15A
+0.1
-0.2
+0.0
+0.1
+0.2
lb_aerobic
LB_Aerobic_180MIN_ZN14B
+0.3
-0.1
-0.1
+0.1
+0.2
lb_aerobic
LB_Aerobic_18HR_ZN18B
+0.3
-0.0
-0.2
+0.1
+0.2
phage
ICP3_phage_41.1_MOI_rep1
+0.0
+0.2
-0.1
+0.1
+0.2
lb_0.5%bileacids_aerobic
LB_0.5%bileacids_aerobic_120MIN_ZN11A
+0.4
-0.1
-0.1
+0.0
+0.2
phage
ICP3_phage_411_MOI_rep2
+0.5
-0.2
+0.1
+0.2
-0.1
phage
ICP1_phage_2.3_MOI_rep1
+0.4
+0.0
-0.0
+0.2
+0.2
phage
ICP3_phage_41.1_MOI_rep2
+0.2
+0.3
+0.4
+0.1
+0.1
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