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Protein
Homologs
Fitness for 5 genes in
Vibrio cholerae E7946 ATCC 55056
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
CSW01_09725 and CSW01_09730 overlap by 16 nucleotides
CSW01_09730 and CSW01_09735 are separated by 130 nucleotides
CSW01_09735 and CSW01_09740 are separated by 158 nucleotides
CSW01_09740 and CSW01_09745 overlap by 31 nucleotides
CSW01_09725: CSW01_09725 - TauD/TfdA family dioxygenase, at 2,093,506 to 2,094,369
_09725
CSW01_09730: CSW01_09730 - hypothetical protein, at 2,094,354 to 2,095,817
_09730
CSW01_09735: CSW01_09735 - LysR family transcriptional regulator, at 2,095,948 to 2,096,877
_09735
CSW01_09740: CSW01_09740 - hypothetical protein, at 2,097,036 to 2,097,227
_09740
CSW01_09745: CSW01_09745 - pvcA protein, at 2,097,197 to 2,099,023
_09745
Group
Condition
CSW01
_09725
CSW01
_09730
CSW01
_09735
CSW01
_09740
CSW01
_09745
phage
ICP1_phage_23.5_MOI_rep2
-0.3
+0.1
-0.2
-1.0
-0.1
phage
ICP1_phage_0.23_MOI_rep1
-0.1
+0.2
+0.1
-1.0
-0.1
phage
ICP3_phage_411_MOI_rep1
-0.5
-0.1
-0.2
+0.1
-0.2
phage
ICP3_phage_41.1_MOI_rep2
-0.4
+0.2
+0.0
-0.3
-0.2
phage
ICP3_phage_4.1_MOI_rep2
-0.0
+0.1
-0.1
-0.3
-0.4
phage
ICP3_phage_0.41_MOI_rep2
-0.4
+0.0
-0.1
+0.2
-0.3
phage
ICP3_phage_41.1_MOI_rep1
-0.2
-0.1
-0.0
-0.3
+0.0
phage
ICP1_phage_235.3_MOI_rep1
-0.1
+0.2
+0.1
-0.8
+0.0
phage
ICP3_phage_0.41_MOI_rep1
-0.0
+0.1
-0.1
-0.4
-0.0
phage
ICP3_phage_4.1_MOI_rep1
-0.4
+0.2
+0.1
+0.1
-0.2
phage
ICP1_phage_0.23_MOI_rep2
+0.0
+0.1
-0.0
-0.1
-0.2
phage
ICP3_phage_411_MOI_rep2
-0.1
+0.0
-0.0
+0.2
-0.2
phage
ICP1_phage_2.3_MOI_rep1
-0.2
+0.3
+0.1
-0.1
-0.1
lb_0.5%bileacids_aerobic
LB_0.5%bileacids_aerobic_18HR_ZN19B
-0.2
-0.1
-0.0
+0.3
+0.1
lb_0.5%bileacids_anaerobic
LB_0.5%bileacids_Anaerobic_120MIN_ZN13A
-0.2
+0.1
+0.0
+0.1
+0.1
lb_0.5%bileacids_aerobic
LB_0.5%bileacids_aerobic_18HR_ZN19A
-0.2
-0.0
+0.1
+0.2
+0.1
lb_aerobic
LB_Aerobic_18HR_ZN18B
-0.1
-0.0
+0.0
+0.3
+0.0
lb_aerobic
LB_Aerobic_18HR_ZN18A
-0.2
+0.0
+0.1
+0.2
+0.1
lb_0.5%bileacids_anaerobic
LB_0.5%bileacids_Anaerobic_180MIN_ZN17A
-0.3
+0.0
+0.0
+0.5
+0.1
phage
ICP1_phage_23.5_MOI_rep1
-0.0
+0.2
-0.1
+0.2
+0.1
lb_anaerobic
LB_Anaerobic_18HR_ZN20B
-0.1
-0.0
+0.1
+0.3
+0.0
lb_aerobic
LB_Aerobic_120MIN_ZN10B
-0.3
+0.0
+0.2
+0.5
+0.1
lb_anaerobic
LB_Anaerobic_120MIN_ZN12A
-0.0
-0.0
-0.0
+0.4
+0.0
lb_0.5%bileacids_anaerobic
LB_0.5%bileacids_Anaerobic_180MIN_ZN17B
-0.2
+0.0
+0.1
+0.4
+0.1
lb_0.5%bileacids_aerobic
LB_0.5%bileacids_aerobic_120MIN_ZN11A
-0.1
+0.1
+0.1
+0.2
+0.1
lb_anaerobic
LB_Anaerobic_60MIN_ZN4B
-0.0
+0.0
+0.1
+0.3
+0.1
phage
NoPhageControl
+0.0
+0.1
+0.1
+0.5
-0.1
lb_0.5%bileacids_anaerobic
LB_0.5%bileacids_Anaerobic_60MIN_ZN5A
-0.4
+0.1
+0.2
+0.7
+0.1
phage
ICP1_phage_2.3_MOI_rep2
-0.1
+0.3
-0.1
+0.7
-0.0
phage
ICP1_phage_235.3_MOI_rep2
-0.3
+0.4
-0.0
+0.8
-0.1
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