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Fitness for 5 genes in
Vibrio cholerae E7946 ATCC 55056
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
CSW01_09560 and CSW01_09565 are separated by 72 nucleotides
CSW01_09565 and CSW01_09570 are separated by 11 nucleotides
CSW01_09570 and CSW01_09575 are separated by 138 nucleotides
CSW01_09575 and CSW01_09580 are separated by 287 nucleotides
CSW01_09560: CSW01_09560 - orotidine-5'-phosphate decarboxylase, at 2,059,642 to 2,060,337
_09560
CSW01_09565: CSW01_09565 - lipopolysaccharide assembly protein LapB, at 2,060,410 to 2,061,579
_09565
CSW01_09570: CSW01_09570 - DUF1049 domain-containing protein, at 2,061,591 to 2,061,872
_09570
CSW01_09575: CSW01_09575 - integration host factor subunit beta, at 2,062,011 to 2,062,289
_09575
CSW01_09580: CSW01_09580 - 30S ribosomal protein S1, at 2,062,577 to 2,064,247
_09580
Group
Condition
CSW01
_09560
CSW01
_09565
CSW01
_09570
CSW01
_09575
CSW01
_09580
lb_aerobic
LB_Aerobic_18HR_ZN18B
-1.4
N.D.
N.D.
N.D.
N.D.
lb_0.5%bileacids_aerobic
LB_0.5%bileacids_aerobic_18HR_ZN19B
-1.4
N.D.
N.D.
N.D.
N.D.
lb_0.5%bileacids_aerobic
LB_0.5%bileacids_aerobic_18HR_ZN19A
-1.2
N.D.
N.D.
N.D.
N.D.
lb_anaerobic
LB_Anaerobic_18HR_ZN20A
-0.9
N.D.
N.D.
N.D.
N.D.
phage
ICP3_phage_4.1_MOI_rep2
-0.8
N.D.
N.D.
N.D.
N.D.
lb_aerobic
LB_Aerobic_180MIN_ZN14A
-0.7
N.D.
N.D.
N.D.
N.D.
lb_aerobic
LB_Aerobic_180MIN_ZN14B
-0.7
N.D.
N.D.
N.D.
N.D.
phage
ICP3_phage_41.1_MOI_rep2
-0.6
N.D.
N.D.
N.D.
N.D.
lb_0.5%bileacids_aerobic
LB_0.5%bileacids_aerobic_180MIN_ZN15A
-0.5
N.D.
N.D.
N.D.
N.D.
lb_0.5%bileacids_anaerobic
LB_0.5%bileacids_Anaerobic_180MIN_ZN17A
-0.5
N.D.
N.D.
N.D.
N.D.
lb_aerobic
LB_Aerobic_60MIN_ZN2B
-0.4
N.D.
N.D.
N.D.
N.D.
phage
ICP3_phage_41.1_MOI_rep1
-0.4
N.D.
N.D.
N.D.
N.D.
phage
ICP1_phage_235.3_MOI_rep1
-0.3
N.D.
N.D.
N.D.
N.D.
lb_anaerobic
LB_Anaerobic_180MIN_ZN16A
-0.3
N.D.
N.D.
N.D.
N.D.
lb_anaerobic
LB_Anaerobic_60MIN_ZN4B
-0.3
N.D.
N.D.
N.D.
N.D.
lb_0.5%bileacids_anaerobic
LB_0.5%bileacids_Anaerobic_60MIN_ZN5A
-0.3
N.D.
N.D.
N.D.
N.D.
phage
ICP3_phage_411_MOI_rep2
-0.3
N.D.
N.D.
N.D.
N.D.
phage
ICP3_phage_0.41_MOI_rep1
-0.3
N.D.
N.D.
N.D.
N.D.
lb_aerobic
LB_Aerobic_18HR_ZN18A
-0.2
N.D.
N.D.
N.D.
N.D.
lb_0.5%bileacids_anaerobic
LB_0.5%bileacids_Anaerobic_120MIN_ZN13B
-0.2
N.D.
N.D.
N.D.
N.D.
lb_0.5%bileacids_anaerobic
LB_0.5%bileacids_Anaerobic_120MIN_ZN13A
-0.2
N.D.
N.D.
N.D.
N.D.
lb_anaerobic
LB_Anaerobic_120MIN_ZN12B
-0.2
N.D.
N.D.
N.D.
N.D.
lb_0.5%bileacids_aerobic
LB_0.5%bileacids_aerobic_120MIN_ZN11A
-0.2
N.D.
N.D.
N.D.
N.D.
lb_aerobic
LB_Aerobic_120MIN_ZN10B
-0.2
N.D.
N.D.
N.D.
N.D.
lb_0.5%bileacids_aerobic
LB_0.5%bileacids_aerobic_180MIN_ZN15B
-0.2
N.D.
N.D.
N.D.
N.D.
phage
ICP1_phage_2.3_MOI_rep2
+0.2
N.D.
N.D.
N.D.
N.D.
phage
NoPhageControl
+0.2
N.D.
N.D.
N.D.
N.D.
phage
ICP1_phage_23.5_MOI_rep1
+0.4
N.D.
N.D.
N.D.
N.D.
phage
ICP1_phage_2.3_MOI_rep1
+0.5
N.D.
N.D.
N.D.
N.D.
phage
ICP1_phage_0.23_MOI_rep1
+0.6
N.D.
N.D.
N.D.
N.D.
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