Fitness for 5 genes in Vibrio cholerae E7946 ATCC 55056

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500 ntCSW01_09475 and CSW01_09480 are separated by 27 nucleotidesCSW01_09480 and CSW01_09485 are separated by 52 nucleotidesCSW01_09485 and CSW01_09490 overlap by 1 nucleotidesCSW01_09490 and CSW01_09495 are separated by 12 nucleotides CSW01_09475: CSW01_09475 - thiamine kinase, at 2,039,323 to 2,040,183 _09475 CSW01_09480: CSW01_09480 - penicillin-binding protein activator LpoB, at 2,040,211 to 2,040,801 _09480 CSW01_09485: CSW01_09485 - DUF1425 domain-containing protein, at 2,040,854 to 2,041,243 _09485 CSW01_09490: CSW01_09490 - hypothetical protein, at 2,041,243 to 2,042,661 _09490 CSW01_09495: CSW01_09495 - histidine triad nucleotide-binding protein, at 2,042,674 to 2,043,024 _09495
Group Condition CSW01_09475 CSW01_09480 CSW01_09485 CSW01_09490 CSW01_09495
phage ICP3_phage_41.1_MOI_rep1 +0.3 N.D. -2.2 -0.0 -0.2
phage ICP1_phage_235.3_MOI_rep1 -1.0 N.D. -1.8 +0.2 +0.9
phage ICP1_phage_2.3_MOI_rep2 -0.5 N.D. -1.4 -0.1 +0.4
phage ICP1_phage_0.23_MOI_rep1 -0.6 N.D. -2.1 +0.2 +1.0
phage ICP3_phage_41.1_MOI_rep2 -0.5 N.D. -1.1 +0.2 +0.1
lb_0.5%bileacids_aerobic LB_0.5%bileacids_aerobic_18HR_ZN19A -0.2 N.D. -1.0 -0.2 +0.1
lb_0.5%bileacids_anaerobic LB_0.5%bileacids_Anaerobic_180MIN_ZN17A -0.3 N.D. -0.7 -0.1 +0.0
lb_0.5%bileacids_anaerobic LB_0.5%bileacids_Anaerobic_120MIN_ZN13B -0.2 N.D. -0.6 -0.2 +0.0
lb_aerobic LB_Aerobic_180MIN_ZN14A -0.3 N.D. -0.5 -0.2 -0.0
lb_aerobic LB_Aerobic_18HR_ZN18B -0.1 N.D. -0.4 -0.2 -0.2
lb_0.5%bileacids_anaerobic LB_0.5%bileacids_Anaerobic_60MIN_ZN5B -0.0 N.D. -0.5 -0.0 -0.3
lb_anaerobic LB_Anaerobic_60MIN_ZN4B -0.3 N.D. -0.8 -0.2 +0.5
lb_aerobic LB_Aerobic_60MIN_ZN2B -0.5 N.D. -0.5 -0.1 +0.3
phage ICP3_phage_411_MOI_rep1 -0.2 N.D. -0.9 +0.0 +0.4
phage ICP1_phage_0.23_MOI_rep2 -0.5 N.D. -0.3 -0.2 +0.4
lb_anaerobic LB_Anaerobic_180MIN_ZN16B -0.3 N.D. -0.5 -0.0 +0.1
lb_aerobic LB_Aerobic_180MIN_ZN14B -0.4 N.D. -0.3 -0.1 +0.2
lb_0.5%bileacids_aerobic LB_0.5%bileacids_aerobic_180MIN_ZN15B +0.1 N.D. -0.8 +0.0 +0.1
lb_anaerobic LB_Anaerobic_120MIN_ZN12B -0.0 N.D. -0.5 -0.1 +0.2
phage ICP3_phage_0.41_MOI_rep2 -0.3 N.D. -0.3 -0.0 +0.6
phage ICP1_phage_2.3_MOI_rep1 -0.2 N.D. -0.8 +0.3 +0.9
lb_0.5%bileacids_aerobic LB_0.5%bileacids_aerobic_120MIN_ZN11A -0.1 N.D. -0.3 +0.0 +0.6
phage ICP3_phage_411_MOI_rep2 -0.5 N.D. -0.4 +0.0 +1.2
lb_aerobic LB_Aerobic_120MIN_ZN10B -0.3 N.D. +0.0 +0.1 +0.6
phage ICP1_phage_23.5_MOI_rep2 -0.0 N.D. +0.6 +0.1 -0.1
phage ICP1_phage_235.3_MOI_rep2 -0.3 N.D. -0.1 +0.0 +1.1
lb_anaerobic LB_Anaerobic_120MIN_ZN12A +0.0 N.D. -0.1 -0.1 +0.9
phage ICP3_phage_4.1_MOI_rep2 +0.0 N.D. +0.2 +0.1 +0.8
phage ICP3_phage_4.1_MOI_rep1 +0.2 N.D. +0.3 +0.1 +0.9
phage ICP1_phage_23.5_MOI_rep1 -0.1 N.D. +0.6 -0.1 +1.4
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CSW01_09475
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CSW01_09480
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