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Fitness for 5 genes in
Vibrio cholerae E7946 ATCC 55056
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
CSW01_09400 and CSW01_09405 overlap by 20 nucleotides
CSW01_09405 and CSW01_09410 overlap by 1 nucleotides
CSW01_09410 and CSW01_09415 are separated by 30 nucleotides
CSW01_09415 and CSW01_09420 overlap by 7 nucleotides
CSW01_09400: CSW01_09400 - hypothetical protein, at 2,019,474 to 2,019,653
_09400
CSW01_09405: CSW01_09405 - tetraacyldisaccharide 4'-kinase, at 2,019,634 to 2,020,644
_09405
CSW01_09410: CSW01_09410 - lipid A export ATP-binding/permease MsbA, at 2,020,644 to 2,022,392
_09410
CSW01_09415: CSW01_09415 - DNA internalization-related competence protein ComEC/Rec2, at 2,022,423 to 2,024,681
_09415
CSW01_09420: CSW01_09420 - DUF2062 domain-containing protein, at 2,024,675 to 2,025,205
_09420
Group
Condition
CSW01
_09400
CSW01
_09405
CSW01
_09410
CSW01
_09415
CSW01
_09420
phage
ICP1_phage_23.5_MOI_rep1
N.D.
N.D.
N.D.
+0.1
-3.6
phage
ICP1_phage_2.3_MOI_rep2
N.D.
N.D.
N.D.
+0.1
-2.0
phage
ICP1_phage_235.3_MOI_rep2
N.D.
N.D.
N.D.
+0.3
-2.2
lb_0.5%bileacids_anaerobic
LB_0.5%bileacids_Anaerobic_18HR_ZN21A
N.D.
N.D.
N.D.
+0.0
-1.6
phage
ICP1_phage_0.23_MOI_rep2
N.D.
N.D.
N.D.
+0.0
-1.5
phage
ICP1_phage_0.23_MOI_rep1
N.D.
N.D.
N.D.
+0.2
-1.6
phage
ICP3_phage_0.41_MOI_rep2
N.D.
N.D.
N.D.
-0.0
-1.3
lb_0.5%bileacids_anaerobic
LB_0.5%bileacids_Anaerobic_180MIN_ZN17B
N.D.
N.D.
N.D.
+0.1
-1.3
lb_aerobic
LB_Aerobic_180MIN_ZN14B
N.D.
N.D.
N.D.
+0.0
-1.2
lb_aerobic
LB_Aerobic_18HR_ZN18A
N.D.
N.D.
N.D.
-0.0
-0.8
phage
ICP1_phage_2.3_MOI_rep1
N.D.
N.D.
N.D.
+0.2
-1.0
phage
ICP3_phage_4.1_MOI_rep2
N.D.
N.D.
N.D.
+0.1
-0.8
phage
ICP3_phage_411_MOI_rep2
N.D.
N.D.
N.D.
+0.2
-0.7
phage
NoPhageControl
N.D.
N.D.
N.D.
-0.1
-0.4
lb_anaerobic
LB_Anaerobic_18HR_ZN20B
N.D.
N.D.
N.D.
+0.0
-0.5
lb_aerobic
LB_Aerobic_18HR_ZN18B
N.D.
N.D.
N.D.
-0.0
-0.3
lb_0.5%bileacids_aerobic
LB_0.5%bileacids_aerobic_18HR_ZN19B
N.D.
N.D.
N.D.
+0.0
-0.4
lb_anaerobic
LB_Anaerobic_180MIN_ZN16A
N.D.
N.D.
N.D.
+0.1
-0.4
lb_anaerobic
LB_Anaerobic_120MIN_ZN12A
N.D.
N.D.
N.D.
-0.0
-0.3
phage
ICP1_phage_23.5_MOI_rep2
N.D.
N.D.
N.D.
+0.2
-0.4
phage
ICP3_phage_0.41_MOI_rep1
N.D.
N.D.
N.D.
+0.2
-0.4
phage
ICP3_phage_41.1_MOI_rep1
N.D.
N.D.
N.D.
+0.3
-0.3
phage
ICP3_phage_4.1_MOI_rep1
N.D.
N.D.
N.D.
+0.1
+0.1
lb_0.5%bileacids_anaerobic
LB_0.5%bileacids_Anaerobic_60MIN_ZN5A
N.D.
N.D.
N.D.
-0.1
+0.4
lb_aerobic_phage
LB_Aerobic_PHAGE INFX20MPI_ZN6A
N.D.
N.D.
N.D.
+0.0
+0.3
lb_0.5%bileacids_anaerobic
LB_0.5%bileacids_Anaerobic_180MIN_ZN17A
N.D.
N.D.
N.D.
+0.0
+0.4
lb_aerobic
LB_Aerobic_180MIN_ZN14A
N.D.
N.D.
N.D.
+0.0
+0.6
lb_aerobic
LB_Aerobic_60MIN_ZN2B
N.D.
N.D.
N.D.
+0.1
+0.7
phage
ICP1_phage_235.3_MOI_rep1
N.D.
N.D.
N.D.
+0.3
+0.6
phage
ICP3_phage_41.1_MOI_rep2
N.D.
N.D.
N.D.
+0.2
+0.7
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