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Protein
Homologs
Fitness for 5 genes in
Vibrio cholerae E7946 ATCC 55056
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
CSW01_09325 and CSW01_09330 are separated by 147 nucleotides
CSW01_09330 and CSW01_09335 are separated by 178 nucleotides
CSW01_09335 and CSW01_09340 are separated by 414 nucleotides
CSW01_09340 and CSW01_09345 are separated by 44 nucleotides
CSW01_09325: CSW01_09325 - ABC transporter, at 2,000,574 to 2,001,314
_09325
CSW01_09330: CSW01_09330 - ABC transporter substrate-binding protein, at 2,001,462 to 2,002,244
_09330
CSW01_09335: CSW01_09335 - histidine/lysine/arginine/ornithine ABC transporter ATP-binding protein HisP, at 2,002,423 to 2,003,193
_09335
CSW01_09340: CSW01_09340 - hypothetical protein, at 2,003,608 to 2,003,853
_09340
CSW01_09345: CSW01_09345 - DUF3360 domain-containing protein, at 2,003,898 to 2,005,451
_09345
Group
Condition
CSW01
_09325
CSW01
_09330
CSW01
_09335
CSW01
_09340
CSW01
_09345
phage
ICP1_phage_235.3_MOI_rep1
-0.1
-0.0
-0.3
-1.7
+0.1
phage
ICP1_phage_0.23_MOI_rep2
-0.5
-0.0
-0.4
-0.2
-0.2
phage
ICP3_phage_41.1_MOI_rep1
-0.5
-0.1
-0.3
-0.0
+0.2
phage
ICP1_phage_23.5_MOI_rep2
+0.0
-0.1
-0.0
-0.7
+0.1
phage
ICP3_phage_411_MOI_rep1
+0.3
+0.2
+0.0
-1.3
+0.1
phage
ICP3_phage_0.41_MOI_rep2
+0.2
-0.0
-0.3
-0.2
-0.2
phage
ICP3_phage_4.1_MOI_rep2
+0.2
-0.1
+0.2
-0.7
-0.0
phage
ICP3_phage_411_MOI_rep2
+0.2
-0.2
-0.0
-0.4
-0.1
lb_0.5%bileacids_anaerobic
LB_0.5%bileacids_Anaerobic_120MIN_ZN13A
+0.2
-0.1
-0.0
-0.3
-0.1
phage
ICP3_phage_0.41_MOI_rep1
-0.2
-0.1
-0.1
+0.3
-0.1
phage
NoPhageControl
+0.4
-0.0
+0.0
-0.4
-0.1
phage
ICP1_phage_2.3_MOI_rep2
+0.1
-0.2
+0.2
-0.2
-0.1
phage
ICP3_phage_4.1_MOI_rep1
+0.1
-0.1
+0.2
-0.2
-0.0
phage
ICP1_phage_235.3_MOI_rep2
+0.1
+0.3
+0.2
-0.2
-0.1
lb_anaerobic
LB_Anaerobic_18HR_ZN20A
-0.0
-0.0
-0.1
+0.4
+0.1
lb_anaerobic
LB_Anaerobic_60MIN_ZN4B
-0.2
-0.1
-0.1
+0.6
+0.2
lb_0.5%bileacids_anaerobic
LB_0.5%bileacids_Anaerobic_60MIN_ZN5A
-0.3
+0.0
+0.0
+0.6
+0.1
lb_aerobic
LB_Aerobic_18HR_ZN18B
+0.0
+0.0
-0.1
+0.3
+0.2
lb_0.5%bileacids_aerobic
LB_0.5%bileacids_aerobic_120MIN_ZN11B
+0.1
-0.0
+0.1
+0.4
+0.1
phage
ICP1_phage_0.23_MOI_rep1
+0.5
+0.1
-0.2
+0.1
+0.1
lb_0.5%bileacids_anaerobic
LB_0.5%bileacids_Anaerobic_180MIN_ZN17B
+0.1
-0.0
+0.1
+0.3
+0.1
lb_aerobic
LB_Aerobic_60MIN_ZN2B
+0.2
+0.0
+0.0
+0.2
+0.2
lb_anaerobic
LB_Anaerobic_120MIN_ZN12A
+0.0
+0.0
-0.1
+0.5
+0.1
lb_0.5%bileacids_aerobic
LB_0.5%bileacids_aerobic_18HR_ZN19A
+0.2
+0.0
-0.0
+0.3
+0.2
lb_aerobic_phage
LB_Aerobic_PHAGE INFX20MPI_ZN6A
+0.3
+0.0
-0.3
+0.3
+0.3
lb_anaerobic
LB_Anaerobic_180MIN_ZN16A
+0.1
+0.1
+0.2
+0.2
+0.2
lb_aerobic
LB_Aerobic_18HR_ZN18A
+0.4
+0.0
+0.0
+0.1
+0.2
lb_aerobic
LB_Aerobic_180MIN_ZN14A
-0.0
-0.0
+0.1
+0.8
+0.1
lb_0.5%bileacids_anaerobic
LB_0.5%bileacids_Anaerobic_60MIN_ZN5B
+0.1
+0.0
+0.1
+0.7
+0.2
lb_0.5%bileacids_aerobic
LB_0.5%bileacids_aerobic_180MIN_ZN15B
+0.5
+0.1
+0.0
+0.5
+0.2
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