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Fitness for 5 genes in
Vibrio cholerae E7946 ATCC 55056
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
CSW01_09180 and CSW01_09185 are separated by 173 nucleotides
CSW01_09185 and CSW01_09190 are separated by 15 nucleotides
CSW01_09190 and CSW01_09195 are separated by 31 nucleotides
CSW01_09195 and CSW01_09200 are separated by 14 nucleotides
CSW01_09180: CSW01_09180 - quinolinate synthase, at 1,973,317 to 1,974,378
_09180
CSW01_09185: CSW01_09185 - tol-pal system protein YbgF, at 1,974,552 to 1,975,316
_09185
CSW01_09190: CSW01_09190 - peptidoglycan-associated lipoprotein, at 1,975,332 to 1,975,850
_09190
CSW01_09195: CSW01_09195 - protein TolB, at 1,975,882 to 1,977,234
_09195
CSW01_09200: CSW01_09200 - protein TolA, at 1,977,249 to 1,978,319
_09200
Group
Condition
CSW01
_09180
CSW01
_09185
CSW01
_09190
CSW01
_09195
CSW01
_09200
phage
ICP3_phage_41.1_MOI_rep1
-1.4
+0.3
N.D.
N.D.
N.D.
phage
ICP1_phage_2.3_MOI_rep2
-0.8
-0.1
N.D.
N.D.
N.D.
lb_0.5%bileacids_anaerobic
LB_0.5%bileacids_Anaerobic_18HR_ZN21A
-0.1
-0.8
N.D.
N.D.
N.D.
phage
ICP1_phage_235.3_MOI_rep1
-0.6
-0.2
N.D.
N.D.
N.D.
phage
ICP1_phage_2.3_MOI_rep1
-0.5
-0.3
N.D.
N.D.
N.D.
lb_aerobic
LB_Aerobic_60MIN_ZN2B
-0.3
-0.4
N.D.
N.D.
N.D.
lb_anaerobic
LB_Anaerobic_120MIN_ZN12B
-0.1
-0.4
N.D.
N.D.
N.D.
phage
ICP3_phage_41.1_MOI_rep2
-0.4
-0.2
N.D.
N.D.
N.D.
phage
ICP3_phage_4.1_MOI_rep2
-0.3
-0.1
N.D.
N.D.
N.D.
lb_anaerobic
LB_Anaerobic_18HR_ZN20A
+0.1
-0.5
N.D.
N.D.
N.D.
lb_0.5%bileacids_aerobic
LB_0.5%bileacids_aerobic_180MIN_ZN15B
-0.2
-0.2
N.D.
N.D.
N.D.
lb_0.5%bileacids_anaerobic
LB_0.5%bileacids_Anaerobic_60MIN_ZN5A
-0.4
+0.1
N.D.
N.D.
N.D.
lb_0.5%bileacids_anaerobic
LB_0.5%bileacids_Anaerobic_60MIN_ZN5B
-0.3
+0.1
N.D.
N.D.
N.D.
lb_0.5%bileacids_aerobic
LB_0.5%bileacids_aerobic_120MIN_ZN11B
+0.0
-0.3
N.D.
N.D.
N.D.
phage
ICP3_phage_4.1_MOI_rep1
-0.4
+0.1
N.D.
N.D.
N.D.
lb_anaerobic
LB_Anaerobic_18HR_ZN20B
+0.1
-0.3
N.D.
N.D.
N.D.
phage
ICP1_phage_0.23_MOI_rep2
-0.6
+0.5
N.D.
N.D.
N.D.
phage
ICP3_phage_411_MOI_rep1
-0.6
+0.5
N.D.
N.D.
N.D.
lb_aerobic
LB_Aerobic_120MIN_ZN10B
+0.1
-0.2
N.D.
N.D.
N.D.
lb_anaerobic
LB_Anaerobic_180MIN_ZN16B
+0.2
-0.3
N.D.
N.D.
N.D.
lb_aerobic_phage
LB_Aerobic_PHAGE INFX20MPI_ZN6A
+0.1
-0.2
N.D.
N.D.
N.D.
phage
ICP1_phage_0.23_MOI_rep1
-0.3
+0.3
N.D.
N.D.
N.D.
phage
ICP3_phage_0.41_MOI_rep2
-0.4
+0.4
N.D.
N.D.
N.D.
phage
ICP1_phage_235.3_MOI_rep2
-0.5
+0.5
N.D.
N.D.
N.D.
phage
ICP1_phage_23.5_MOI_rep2
-0.3
+0.3
N.D.
N.D.
N.D.
phage
ICP1_phage_23.5_MOI_rep1
-0.3
+0.3
N.D.
N.D.
N.D.
lb_aerobic
LB_Aerobic_180MIN_ZN14A
+0.3
-0.2
N.D.
N.D.
N.D.
phage
ICP3_phage_411_MOI_rep2
-0.1
+0.2
N.D.
N.D.
N.D.
phage
ICP3_phage_0.41_MOI_rep1
-0.2
+0.4
N.D.
N.D.
N.D.
phage
NoPhageControl
+0.1
+0.3
N.D.
N.D.
N.D.
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