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Fitness for 5 genes in
Vibrio cholerae E7946 ATCC 55056
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
CSW01_09045 and CSW01_09050 are separated by 89 nucleotides
CSW01_09050 and CSW01_09055 are separated by 277 nucleotides
CSW01_09055 and CSW01_09060 are separated by 50 nucleotides
CSW01_09060 and CSW01_09065 are separated by 106 nucleotides
CSW01_09045: CSW01_09045 - hypothetical protein, at 1,946,548 to 1,946,784
_09045
CSW01_09050: CSW01_09050 - XRE family transcriptional regulator, at 1,946,874 to 1,947,335
_09050
CSW01_09055: CSW01_09055 - DUF2787 domain-containing protein, at 1,947,613 to 1,947,876
_09055
CSW01_09060: CSW01_09060 - DUF2787 domain-containing protein, at 1,947,927 to 1,948,373
_09060
CSW01_09065: CSW01_09065 - GTPase, at 1,948,480 to 1,949,466
_09065
Group
Condition
CSW01
_09045
CSW01
_09050
CSW01
_09055
CSW01
_09060
CSW01
_09065
phage
ICP3_phage_0.41_MOI_rep2
-0.8
N.D.
-0.8
+0.4
-0.1
phage
ICP3_phage_41.1_MOI_rep1
-1.1
N.D.
-0.2
+0.5
-0.3
phage
ICP1_phage_235.3_MOI_rep2
-0.4
N.D.
-0.7
+0.5
-0.2
phage
ICP1_phage_23.5_MOI_rep2
-0.5
N.D.
-0.2
+0.4
-0.4
lb_0.5%bileacids_anaerobic
LB_0.5%bileacids_Anaerobic_120MIN_ZN13B
-0.9
N.D.
+0.1
+0.1
+0.0
phage
ICP1_phage_2.3_MOI_rep1
-1.1
N.D.
+0.6
-0.2
+0.2
lb_0.5%bileacids_anaerobic
LB_0.5%bileacids_Anaerobic_60MIN_ZN5A
-0.5
N.D.
-0.1
+0.1
+0.0
lb_0.5%bileacids_anaerobic
LB_0.5%bileacids_Anaerobic_120MIN_ZN13A
-0.6
N.D.
-0.0
+0.1
+0.1
lb_0.5%bileacids_aerobic
LB_0.5%bileacids_aerobic_120MIN_ZN11B
-0.5
N.D.
-0.2
+0.2
-0.0
lb_anaerobic
LB_Anaerobic_18HR_ZN20B
-0.3
N.D.
-0.3
+0.2
-0.1
lb_0.5%bileacids_anaerobic
LB_0.5%bileacids_Anaerobic_180MIN_ZN17A
-0.8
N.D.
+0.2
+0.2
+0.0
lb_aerobic_phage
LB_Aerobic_PHAGE INFX20MPI_ZN6A
-0.3
N.D.
-0.3
+0.2
+0.0
lb_aerobic
LB_Aerobic_60MIN_ZN2B
-0.3
N.D.
+0.2
+0.0
-0.2
phage
ICP3_phage_4.1_MOI_rep2
-0.3
N.D.
-0.3
+0.5
-0.1
lb_anaerobic
LB_Anaerobic_18HR_ZN20A
-0.4
N.D.
+0.1
+0.2
+0.0
lb_0.5%bileacids_aerobic
LB_0.5%bileacids_aerobic_120MIN_ZN11A
-0.3
N.D.
-0.2
+0.3
+0.1
lb_anaerobic
LB_Anaerobic_60MIN_ZN4B
-0.5
N.D.
+0.1
+0.2
+0.1
phage
ICP1_phage_2.3_MOI_rep2
-0.6
N.D.
+0.4
+0.3
-0.1
lb_anaerobic
LB_Anaerobic_120MIN_ZN12B
-0.4
N.D.
+0.1
+0.3
+0.0
phage
ICP3_phage_0.41_MOI_rep1
-0.2
N.D.
-0.4
+0.6
-0.0
lb_aerobic
LB_Aerobic_120MIN_ZN10B
-0.4
N.D.
+0.2
+0.2
+0.0
lb_anaerobic
LB_Anaerobic_120MIN_ZN12A
-0.6
N.D.
+0.5
+0.2
+0.0
phage
ICP3_phage_411_MOI_rep1
-0.2
N.D.
-0.2
+0.6
-0.1
phage
ICP3_phage_41.1_MOI_rep2
-0.3
N.D.
-0.1
+0.5
+0.0
lb_anaerobic
LB_Anaerobic_180MIN_ZN16B
-0.4
N.D.
+0.3
+0.3
+0.1
phage
ICP3_phage_4.1_MOI_rep1
-0.1
N.D.
+0.0
+0.6
-0.2
phage
ICP1_phage_23.5_MOI_rep1
-0.7
N.D.
+0.3
+0.9
-0.0
phage
ICP1_phage_235.3_MOI_rep1
+0.1
N.D.
-0.3
+0.7
-0.1
phage
NoPhageControl
+0.2
N.D.
+0.2
+0.3
+0.1
phage
ICP1_phage_0.23_MOI_rep1
-0.6
N.D.
+1.0
+0.6
+0.1
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