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Homologs
Fitness for 5 genes in
Vibrio cholerae E7946 ATCC 55056
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
CSW01_08965 and CSW01_08970 overlap by 4 nucleotides
CSW01_08970 and CSW01_08975 are separated by 42 nucleotides
CSW01_08975 and CSW01_08980 are separated by 134 nucleotides
CSW01_08980 and CSW01_08985 are separated by 48 nucleotides
CSW01_08965: CSW01_08965 - chemotaxis protein, at 1,935,589 to 1,936,284
_08965
CSW01_08970: CSW01_08970 - IS3 family transposase, at 1,936,281 to 1,937,458
_08970
CSW01_08975: CSW01_08975 - phage tail tape measure protein, at 1,937,501 to 1,938,541
_08975
CSW01_08980: CSW01_08980 - hypothetical protein, at 1,938,676 to 1,939,035
_08980
CSW01_08985: CSW01_08985 - 6-phospho-beta-glucosidase, at 1,939,084 to 1,939,461
_08985
Group
Condition
CSW01
_08965
CSW01
_08970
CSW01
_08975
CSW01
_08980
CSW01
_08985
phage
ICP3_phage_41.1_MOI_rep1
N.D.
N.D.
+0.0
-0.2
-3.6
phage
ICP3_phage_4.1_MOI_rep1
N.D.
N.D.
-0.4
-0.5
-1.5
lb_0.5%bileacids_anaerobic
LB_0.5%bileacids_Anaerobic_120MIN_ZN13B
N.D.
N.D.
+0.1
-0.4
-1.4
phage
ICP3_phage_0.41_MOI_rep2
N.D.
N.D.
-0.1
+0.1
-1.2
phage
ICP1_phage_235.3_MOI_rep1
N.D.
N.D.
-0.1
-1.1
+0.1
phage
ICP3_phage_411_MOI_rep1
N.D.
N.D.
-0.4
-0.2
-0.3
lb_0.5%bileacids_anaerobic
LB_0.5%bileacids_Anaerobic_60MIN_ZN5A
N.D.
N.D.
-0.3
+0.0
-0.5
lb_aerobic
LB_Aerobic_18HR_ZN18A
N.D.
N.D.
+0.1
-0.7
-0.1
phage
ICP1_phage_0.23_MOI_rep2
N.D.
N.D.
-0.3
+0.3
-0.7
phage
ICP1_phage_2.3_MOI_rep2
N.D.
N.D.
-0.1
-1.5
+1.2
lb_anaerobic
LB_Anaerobic_18HR_ZN20B
N.D.
N.D.
-0.1
-0.5
+0.1
lb_anaerobic
LB_Anaerobic_120MIN_ZN12B
N.D.
N.D.
-0.1
-0.4
+0.2
lb_0.5%bileacids_aerobic
LB_0.5%bileacids_aerobic_18HR_ZN19A
N.D.
N.D.
-0.2
-0.3
+0.2
lb_aerobic_phage
LB_Aerobic_PHAGE INFX20MPI_ZN6A
N.D.
N.D.
+0.0
+0.2
-0.6
lb_0.5%bileacids_aerobic
LB_0.5%bileacids_aerobic_18HR_ZN19B
N.D.
N.D.
-0.1
-0.3
+0.2
phage
ICP1_phage_23.5_MOI_rep2
N.D.
N.D.
-0.3
-0.1
+0.4
lb_0.5%bileacids_aerobic
LB_0.5%bileacids_aerobic_120MIN_ZN11A
N.D.
N.D.
-0.1
-0.1
+0.4
phage
ICP1_phage_2.3_MOI_rep1
N.D.
N.D.
+0.1
-0.2
+0.2
lb_0.5%bileacids_anaerobic
LB_0.5%bileacids_Anaerobic_180MIN_ZN17A
N.D.
N.D.
+0.1
-0.5
+0.7
lb_0.5%bileacids_aerobic
LB_0.5%bileacids_aerobic_180MIN_ZN15B
N.D.
N.D.
+0.1
-0.2
+0.6
lb_aerobic
LB_Aerobic_120MIN_ZN10B
N.D.
N.D.
-0.0
+0.0
+0.5
phage
ICP3_phage_0.41_MOI_rep1
N.D.
N.D.
-0.0
+0.1
+0.5
phage
NoPhageControl
N.D.
N.D.
+0.0
-0.4
+0.9
phage
ICP3_phage_411_MOI_rep2
N.D.
N.D.
-0.1
+0.2
+0.6
phage
ICP1_phage_23.5_MOI_rep1
N.D.
N.D.
-0.0
+0.2
+0.5
phage
ICP3_phage_4.1_MOI_rep2
N.D.
N.D.
-0.1
+0.7
+0.1
lb_0.5%bileacids_anaerobic
LB_0.5%bileacids_Anaerobic_120MIN_ZN13A
N.D.
N.D.
+0.2
+0.2
+0.4
phage
ICP1_phage_235.3_MOI_rep2
N.D.
N.D.
-0.1
-0.1
+1.1
phage
ICP3_phage_41.1_MOI_rep2
N.D.
N.D.
-0.1
+0.3
+0.8
phage
ICP1_phage_0.23_MOI_rep1
N.D.
N.D.
+0.1
+0.7
+0.5
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