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Fitness for 5 genes in
Vibrio cholerae E7946 ATCC 55056
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
CSW01_08900 and CSW01_08905 are separated by 181 nucleotides
CSW01_08905 and CSW01_08910 are separated by 128 nucleotides
CSW01_08910 and CSW01_08915 are separated by 37 nucleotides
CSW01_08915 and CSW01_08920 are separated by 7 nucleotides
CSW01_08900: CSW01_08900 - N-acetylneuraminate epimerase, at 1,922,657 to 1,923,811
_08900
CSW01_08905: CSW01_08905 - MurR/RpiR family transcriptional regulator, at 1,923,993 to 1,924,829
_08905
CSW01_08910: CSW01_08910 - N-acetylneuraminate lyase, at 1,924,958 to 1,925,854
_08910
CSW01_08915: CSW01_08915 - ABC transporter permease, at 1,925,892 to 1,927,175
_08915
CSW01_08920: CSW01_08920 - C4-dicarboxylate ABC transporter permease, at 1,927,183 to 1,927,704
_08920
Group
Condition
CSW01
_08900
CSW01
_08905
CSW01
_08910
CSW01
_08915
CSW01
_08920
phage
ICP1_phage_0.23_MOI_rep1
-0.2
-1.0
+0.3
+0.2
-0.1
phage
ICP1_phage_235.3_MOI_rep2
-0.2
-0.5
-0.1
+0.1
-0.2
phage
ICP3_phage_411_MOI_rep2
-0.5
-0.1
-0.1
-0.1
+0.0
lb_aerobic
LB_Aerobic_180MIN_ZN14B
-0.2
-0.2
+0.0
-0.1
-0.1
lb_aerobic
LB_Aerobic_180MIN_ZN14A
+0.0
-0.3
-0.1
+0.1
-0.3
phage
ICP3_phage_41.1_MOI_rep2
-0.3
-0.6
+0.0
+0.1
+0.3
phage
ICP1_phage_2.3_MOI_rep2
-0.1
-0.8
+0.1
+0.0
+0.3
phage
ICP3_phage_411_MOI_rep1
-0.3
-0.5
+0.2
+0.1
+0.1
lb_anaerobic
LB_Anaerobic_180MIN_ZN16A
-0.1
-0.3
+0.2
-0.1
-0.1
phage
ICP1_phage_23.5_MOI_rep2
-0.2
-0.5
+0.1
+0.1
+0.1
lb_0.5%bileacids_aerobic
LB_0.5%bileacids_aerobic_18HR_ZN19A
-0.0
-0.4
+0.1
+0.1
-0.1
phage
ICP3_phage_41.1_MOI_rep1
-0.5
-0.1
+0.0
+0.0
+0.4
lb_aerobic
LB_Aerobic_18HR_ZN18B
+0.0
-0.4
+0.1
+0.0
-0.0
phage
ICP3_phage_0.41_MOI_rep2
-0.5
+0.1
+0.1
+0.0
+0.0
lb_0.5%bileacids_aerobic
LB_0.5%bileacids_aerobic_120MIN_ZN11A
-0.1
+0.2
+0.1
+0.0
-0.4
lb_anaerobic
LB_Anaerobic_180MIN_ZN16B
+0.0
-0.1
+0.2
+0.1
-0.2
lb_0.5%bileacids_anaerobic
LB_0.5%bileacids_Anaerobic_180MIN_ZN17A
-0.1
-0.2
+0.3
+0.1
-0.0
phage
ICP3_phage_0.41_MOI_rep1
+0.0
-0.5
+0.2
+0.2
+0.4
phage
ICP3_phage_4.1_MOI_rep2
-0.1
-0.4
+0.1
+0.2
+0.5
lb_anaerobic
LB_Anaerobic_60MIN_ZN4B
+0.2
+0.2
+0.2
-0.0
-0.2
lb_0.5%bileacids_anaerobic
LB_0.5%bileacids_Anaerobic_60MIN_ZN5B
+0.0
+0.3
+0.2
-0.1
-0.0
lb_aerobic
LB_Aerobic_18HR_ZN18A
+0.1
+0.1
+0.2
-0.1
+0.1
lb_aerobic
LB_Aerobic_120MIN_ZN10B
+0.1
+0.2
+0.2
+0.1
-0.1
lb_anaerobic
LB_Anaerobic_18HR_ZN20A
-0.0
+0.1
+0.2
+0.0
+0.2
phage
ICP3_phage_4.1_MOI_rep1
-0.1
+0.1
+0.0
+0.2
+0.2
phage
ICP1_phage_23.5_MOI_rep1
-0.1
-0.1
-0.0
+0.4
+0.3
lb_0.5%bileacids_anaerobic
LB_0.5%bileacids_Anaerobic_120MIN_ZN13A
+0.1
+0.2
+0.2
+0.1
-0.0
lb_0.5%bileacids_anaerobic
LB_0.5%bileacids_Anaerobic_60MIN_ZN5A
+0.0
+0.2
+0.3
+0.1
+0.1
phage
ICP1_phage_235.3_MOI_rep1
-0.1
+0.1
+0.1
-0.0
+0.7
phage
ICP1_phage_0.23_MOI_rep2
-0.0
+0.2
+0.2
+0.4
+0.4
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