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Fitness for 5 genes in
Vibrio cholerae E7946 ATCC 55056
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
CSW01_08885 and CSW01_08890 are separated by 27 nucleotides
CSW01_08890 and CSW01_08895 are separated by 64 nucleotides
CSW01_08895 and CSW01_08900 are separated by 14 nucleotides
CSW01_08900 and CSW01_08905 are separated by 181 nucleotides
CSW01_08885: CSW01_08885 - hypothetical protein, at 1,916,957 to 1,920,619
_08885
CSW01_08890: CSW01_08890 - YafY family transcriptional regulator, at 1,920,647 to 1,921,507
_08890
CSW01_08895: CSW01_08895 - kelch domain-containing protein, at 1,921,572 to 1,922,642
_08895
CSW01_08900: CSW01_08900 - N-acetylneuraminate epimerase, at 1,922,657 to 1,923,811
_08900
CSW01_08905: CSW01_08905 - MurR/RpiR family transcriptional regulator, at 1,923,993 to 1,924,829
_08905
Group
Condition
CSW01
_08885
CSW01
_08890
CSW01
_08895
CSW01
_08900
CSW01
_08905
phage
ICP1_phage_0.23_MOI_rep1
+0.0
+0.0
+0.1
-0.2
-1.0
phage
ICP1_phage_23.5_MOI_rep2
-0.0
-0.3
-0.0
-0.2
-0.5
phage
ICP1_phage_2.3_MOI_rep2
+0.0
+0.0
-0.1
-0.1
-0.8
phage
ICP3_phage_41.1_MOI_rep2
+0.1
+0.0
-0.1
-0.3
-0.6
phage
ICP3_phage_411_MOI_rep2
-0.2
+0.0
-0.1
-0.5
-0.1
phage
ICP1_phage_235.3_MOI_rep2
-0.0
+0.0
-0.0
-0.2
-0.5
phage
ICP3_phage_411_MOI_rep1
+0.0
-0.0
+0.0
-0.3
-0.5
lb_anaerobic
LB_Anaerobic_18HR_ZN20B
-0.2
-0.0
-0.2
-0.1
-0.3
phage
ICP3_phage_4.1_MOI_rep2
-0.2
+0.1
-0.1
-0.1
-0.4
phage
ICP3_phage_41.1_MOI_rep1
+0.1
+0.0
-0.2
-0.5
-0.1
phage
ICP3_phage_0.41_MOI_rep2
+0.0
-0.2
-0.2
-0.5
+0.1
lb_aerobic
LB_Aerobic_180MIN_ZN14B
-0.1
-0.0
-0.1
-0.2
-0.2
lb_0.5%bileacids_aerobic
LB_0.5%bileacids_aerobic_18HR_ZN19A
-0.1
+0.1
-0.2
-0.0
-0.4
lb_anaerobic
LB_Anaerobic_180MIN_ZN16A
-0.0
+0.0
-0.1
-0.1
-0.3
lb_0.5%bileacids_aerobic
LB_0.5%bileacids_aerobic_180MIN_ZN15B
-0.2
-0.0
-0.1
-0.0
-0.2
lb_0.5%bileacids_aerobic
LB_0.5%bileacids_aerobic_18HR_ZN19B
-0.2
+0.0
-0.1
-0.1
-0.1
lb_0.5%bileacids_aerobic
LB_0.5%bileacids_aerobic_120MIN_ZN11B
-0.1
-0.0
-0.2
-0.1
-0.1
lb_anaerobic
LB_Anaerobic_120MIN_ZN12B
-0.2
+0.1
-0.1
-0.1
-0.2
lb_0.5%bileacids_anaerobic
LB_0.5%bileacids_Anaerobic_18HR_ZN21A
-0.1
+0.0
-0.1
-0.1
-0.1
phage
ICP3_phage_0.41_MOI_rep1
+0.1
+0.1
-0.2
+0.0
-0.5
lb_aerobic
LB_Aerobic_18HR_ZN18B
-0.1
+0.1
-0.1
+0.0
-0.4
phage
NoPhageControl
+0.1
-0.1
-0.2
-0.1
-0.2
lb_0.5%bileacids_aerobic
LB_0.5%bileacids_aerobic_120MIN_ZN11A
-0.2
-0.0
-0.1
-0.1
+0.2
phage
ICP1_phage_23.5_MOI_rep1
+0.2
+0.0
-0.2
-0.1
-0.1
lb_0.5%bileacids_anaerobic
LB_0.5%bileacids_Anaerobic_60MIN_ZN5B
-0.1
+0.2
-0.0
+0.0
+0.3
lb_aerobic
LB_Aerobic_120MIN_ZN10B
-0.1
+0.2
+0.0
+0.1
+0.2
lb_aerobic
LB_Aerobic_18HR_ZN18A
+0.0
+0.2
-0.1
+0.1
+0.1
lb_0.5%bileacids_anaerobic
LB_0.5%bileacids_Anaerobic_120MIN_ZN13A
-0.0
+0.2
-0.0
+0.1
+0.2
lb_0.5%bileacids_anaerobic
LB_0.5%bileacids_Anaerobic_60MIN_ZN5A
+0.0
+0.3
-0.1
+0.0
+0.2
lb_anaerobic
LB_Anaerobic_60MIN_ZN4B
+0.1
+0.1
+0.0
+0.2
+0.2
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