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Homologs
Fitness for 5 genes in
Vibrio cholerae E7946 ATCC 55056
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
CSW01_08840 and CSW01_08845 overlap by 4 nucleotides
CSW01_08845 and CSW01_08850 overlap by 8 nucleotides
CSW01_08850 and CSW01_08855 are separated by 44 nucleotides
CSW01_08855 and CSW01_08860 are separated by 27 nucleotides
CSW01_08840: CSW01_08840 - transcriptional regulator, at 1,900,212 to 1,901,663
_08840
CSW01_08845: CSW01_08845 - chemotaxis protein MotB, at 1,901,660 to 1,902,394
_08845
CSW01_08850: CSW01_08850 - hypothetical protein, at 1,902,387 to 1,904,507
_08850
CSW01_08855: CSW01_08855 - type I restriction endonuclease subunit R, at 1,904,552 to 1,907,620
_08855
CSW01_08860: CSW01_08860 - DUF262 domain-containing protein, at 1,907,648 to 1,909,639
_08860
Group
Condition
CSW01
_08840
CSW01
_08845
CSW01
_08850
CSW01
_08855
CSW01
_08860
phage
ICP3_phage_411_MOI_rep2
-0.1
-0.0
-0.5
-0.1
-0.4
phage
ICP1_phage_23.5_MOI_rep2
-0.2
-0.2
-0.3
+0.1
-0.2
phage
ICP1_phage_2.3_MOI_rep1
-0.1
-0.2
-0.5
+0.1
-0.0
lb_anaerobic
LB_Anaerobic_18HR_ZN20B
-0.2
-0.1
+0.1
-0.2
-0.2
phage
ICP3_phage_4.1_MOI_rep1
+0.0
-0.0
-0.2
-0.1
-0.3
phage
ICP1_phage_0.23_MOI_rep1
-0.2
-0.0
-0.4
+0.1
-0.0
phage
ICP3_phage_4.1_MOI_rep2
+0.1
-0.3
-0.4
+0.3
-0.2
lb_0.5%bileacids_aerobic
LB_0.5%bileacids_aerobic_120MIN_ZN11B
-0.1
-0.1
+0.1
-0.2
-0.2
lb_0.5%bileacids_anaerobic
LB_0.5%bileacids_Anaerobic_18HR_ZN21A
-0.2
+0.1
+0.0
-0.2
-0.2
lb_aerobic
LB_Aerobic_18HR_ZN18B
-0.1
-0.1
+0.1
-0.1
-0.1
phage
ICP3_phage_0.41_MOI_rep1
-0.3
-0.2
+0.2
-0.0
+0.1
lb_aerobic_phage
LB_Aerobic_PHAGE INFX20MPI_ZN6A
-0.3
+0.1
+0.1
-0.0
-0.2
phage
ICP1_phage_235.3_MOI_rep1
+0.1
-0.0
-0.3
-0.2
+0.2
lb_anaerobic
LB_Anaerobic_180MIN_ZN16A
-0.1
-0.1
+0.2
-0.2
-0.0
lb_0.5%bileacids_aerobic
LB_0.5%bileacids_aerobic_180MIN_ZN15A
+0.1
-0.2
+0.2
-0.1
-0.2
lb_aerobic
LB_Aerobic_180MIN_ZN14B
+0.2
-0.1
+0.1
-0.1
-0.1
phage
ICP1_phage_235.3_MOI_rep2
+0.3
-0.1
-0.4
+0.1
+0.1
lb_0.5%bileacids_anaerobic
LB_0.5%bileacids_Anaerobic_120MIN_ZN13B
-0.1
+0.1
+0.2
-0.0
-0.1
lb_aerobic
LB_Aerobic_180MIN_ZN14A
-0.1
+0.0
+0.3
-0.1
+0.0
phage
ICP3_phage_0.41_MOI_rep2
+0.1
-0.1
-0.1
-0.1
+0.3
lb_aerobic
LB_Aerobic_60MIN_ZN2B
+0.2
+0.1
+0.1
-0.1
-0.2
phage
ICP3_phage_41.1_MOI_rep2
+0.3
-0.0
-0.2
+0.2
-0.1
phage
ICP1_phage_0.23_MOI_rep2
+0.3
-0.1
-0.4
+0.1
+0.2
lb_0.5%bileacids_anaerobic
LB_0.5%bileacids_Anaerobic_60MIN_ZN5A
+0.0
-0.0
+0.4
-0.1
-0.2
lb_0.5%bileacids_anaerobic
LB_0.5%bileacids_Anaerobic_120MIN_ZN13A
-0.0
+0.1
+0.3
-0.1
-0.1
lb_0.5%bileacids_anaerobic
LB_0.5%bileacids_Anaerobic_180MIN_ZN17B
+0.0
-0.1
+0.3
-0.0
-0.1
phage
ICP3_phage_41.1_MOI_rep1
+0.3
+0.0
-0.3
+0.0
+0.1
phage
ICP1_phage_2.3_MOI_rep2
+0.3
+0.1
+0.0
-0.2
+0.0
lb_aerobic
LB_Aerobic_18HR_ZN18A
-0.1
+0.1
+0.4
-0.1
+0.0
lb_anaerobic
LB_Anaerobic_180MIN_ZN16B
+0.0
+0.1
+0.3
-0.0
-0.1
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