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Protein
Homologs
Fitness for 5 genes in
Vibrio cholerae E7946 ATCC 55056
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
CSW01_08785 and CSW01_08790 are separated by 15 nucleotides
CSW01_08790 and CSW01_08795 are separated by 221 nucleotides
CSW01_08795 and CSW01_08800 overlap by 4 nucleotides
CSW01_08800 and CSW01_08805 overlap by 4 nucleotides
CSW01_08785: CSW01_08785 - DUF4056 domain-containing protein, at 1,883,296 to 1,884,417
_08785
CSW01_08790: CSW01_08790 - mechanosensitive ion channel protein MscS, at 1,884,433 to 1,886,142
_08790
CSW01_08795: CSW01_08795 - paraquat-inducible protein A, at 1,886,364 to 1,887,668
_08795
CSW01_08800: CSW01_08800 - paraquat-inducible protein B, at 1,887,665 to 1,889,308
_08800
CSW01_08805: CSW01_08805 - hypothetical protein, at 1,889,305 to 1,889,883
_08805
Group
Condition
CSW01
_08785
CSW01
_08790
CSW01
_08795
CSW01
_08800
CSW01
_08805
phage
ICP1_phage_23.5_MOI_rep1
-0.2
-0.0
-0.4
+0.3
-1.1
lb_0.5%bileacids_aerobic
LB_0.5%bileacids_aerobic_120MIN_ZN11B
-0.2
-0.1
-0.1
-0.4
-0.2
lb_aerobic_phage
LB_Aerobic_PHAGE INFX20MPI_ZN6A
-0.3
-0.1
-0.1
-0.2
-0.1
phage
ICP3_phage_4.1_MOI_rep1
-0.1
-0.1
-0.2
-0.1
-0.3
phage
ICP3_phage_411_MOI_rep1
-0.0
-0.1
-0.2
+0.0
-0.4
phage
ICP1_phage_235.3_MOI_rep1
-0.0
-0.1
-0.2
-0.3
-0.0
lb_0.5%bileacids_aerobic
LB_0.5%bileacids_aerobic_180MIN_ZN15B
-0.1
-0.0
-0.1
-0.4
-0.0
lb_0.5%bileacids_anaerobic
LB_0.5%bileacids_Anaerobic_180MIN_ZN17B
-0.3
-0.0
-0.1
-0.2
+0.0
lb_0.5%bileacids_anaerobic
LB_0.5%bileacids_Anaerobic_60MIN_ZN5B
-0.3
-0.1
-0.0
-0.2
+0.0
lb_anaerobic
LB_Anaerobic_120MIN_ZN12A
-0.1
-0.1
-0.0
-0.1
-0.2
phage
ICP3_phage_41.1_MOI_rep2
-0.0
-0.2
-0.2
-0.0
-0.1
phage
ICP1_phage_235.3_MOI_rep2
-0.2
-0.1
-0.2
-0.1
+0.1
lb_aerobic
LB_Aerobic_18HR_ZN18A
-0.3
+0.0
-0.1
-0.2
+0.0
lb_aerobic
LB_Aerobic_180MIN_ZN14A
-0.1
+0.0
-0.1
-0.1
-0.3
lb_0.5%bileacids_anaerobic
LB_0.5%bileacids_Anaerobic_18HR_ZN21A
-0.0
-0.2
-0.1
-0.3
-0.0
phage
ICP3_phage_411_MOI_rep2
+0.0
+0.1
-0.3
-0.1
-0.3
phage
ICP1_phage_0.23_MOI_rep1
+0.1
+0.1
-0.4
+0.1
-0.3
phage
ICP3_phage_0.41_MOI_rep2
-0.0
+0.1
-0.2
-0.1
-0.2
lb_0.5%bileacids_anaerobic
LB_0.5%bileacids_Anaerobic_120MIN_ZN13B
-0.3
-0.2
-0.0
-0.0
+0.2
phage
ICP1_phage_0.23_MOI_rep2
+0.1
+0.2
-0.3
-0.1
-0.3
phage
ICP1_phage_2.3_MOI_rep2
+0.0
+0.1
-0.2
-0.0
-0.3
phage
ICP3_phage_41.1_MOI_rep1
-0.1
+0.2
-0.2
-0.0
-0.1
lb_0.5%bileacids_anaerobic
LB_0.5%bileacids_Anaerobic_120MIN_ZN13A
+0.1
-0.1
+0.1
-0.3
-0.0
phage
ICP3_phage_0.41_MOI_rep1
+0.3
+0.2
-0.5
-0.0
-0.1
lb_anaerobic
LB_Anaerobic_180MIN_ZN16A
-0.1
-0.1
-0.0
-0.2
+0.2
phage
ICP3_phage_4.1_MOI_rep2
+0.1
+0.3
-0.3
-0.2
+0.1
phage
ICP1_phage_23.5_MOI_rep2
+0.1
+0.1
-0.3
+0.1
-0.0
lb_anaerobic
LB_Anaerobic_180MIN_ZN16B
-0.0
-0.0
+0.1
-0.1
+0.3
lb_aerobic
LB_Aerobic_60MIN_ZN2B
+0.1
+0.1
-0.1
-0.1
+0.3
phage
ICP1_phage_2.3_MOI_rep1
+0.2
+0.2
-0.2
+0.2
-0.1
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