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Protein
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Fitness for 5 genes in
Vibrio cholerae E7946 ATCC 55056
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
CSW01_08605 and CSW01_08610 are separated by 47 nucleotides
CSW01_08610 and CSW01_08615 are separated by 77 nucleotides
CSW01_08615 and CSW01_08620 are separated by 81 nucleotides
CSW01_08620 and CSW01_08625 overlap by 4 nucleotides
CSW01_08605: CSW01_08605 - YgiQ family radical SAM protein, at 1,844,307 to 1,846,676
_08605
CSW01_08610: CSW01_08610 - LysE family translocator, at 1,846,724 to 1,847,338
_08610
CSW01_08615: CSW01_08615 - Lrp/AsnC family transcriptional regulator, at 1,847,416 to 1,847,859
_08615
CSW01_08620: CSW01_08620 - chromosome partition protein MukB, at 1,847,941 to 1,852,416
_08620
CSW01_08625: CSW01_08625 - chromosome partition protein MukE, at 1,852,413 to 1,853,156
_08625
Group
Condition
CSW01
_08605
CSW01
_08610
CSW01
_08615
CSW01
_08620
CSW01
_08625
lb_0.5%bileacids_aerobic
LB_0.5%bileacids_aerobic_18HR_ZN19B
+0.1
+0.2
-0.0
-2.0
-1.9
lb_anaerobic
LB_Anaerobic_18HR_ZN20A
+0.0
+0.0
-0.0
-1.7
-1.6
lb_aerobic
LB_Aerobic_180MIN_ZN14A
+0.1
-0.3
-0.2
-1.1
-1.0
lb_anaerobic
LB_Anaerobic_18HR_ZN20B
+0.1
-0.1
-0.4
-1.2
-1.0
phage
NoPhageControl
-0.1
-0.5
-0.1
-1.1
-0.7
lb_0.5%bileacids_aerobic
LB_0.5%bileacids_aerobic_18HR_ZN19A
+0.1
+0.0
-0.1
-1.3
-0.9
lb_0.5%bileacids_anaerobic
LB_0.5%bileacids_Anaerobic_18HR_ZN21A
+0.0
+0.0
-0.3
-1.0
-1.0
lb_aerobic
LB_Aerobic_18HR_ZN18B
+0.2
+0.1
-0.1
-1.2
-1.1
lb_0.5%bileacids_anaerobic
LB_0.5%bileacids_Anaerobic_180MIN_ZN17B
+0.1
+0.4
-0.5
-1.2
-0.9
phage
NoPhageControl
-0.1
-0.0
+0.1
-1.0
-0.8
lb_aerobic
LB_Aerobic_18HR_ZN18A
+0.1
+0.0
-0.3
-1.1
-0.7
phage
ICP3_phage_41.1_MOI_rep2
-0.1
-0.0
+0.2
-0.6
-1.0
phage
ICP1_phage_0.23_MOI_rep2
-0.2
+0.3
+0.2
-0.5
-1.4
phage
ICP3_phage_0.41_MOI_rep1
-0.0
-0.2
+0.5
-0.8
-1.1
lb_0.5%bileacids_aerobic
LB_0.5%bileacids_aerobic_180MIN_ZN15B
+0.2
+0.2
-0.1
-0.8
-1.0
lb_0.5%bileacids_aerobic
LB_0.5%bileacids_aerobic_180MIN_ZN15A
+0.1
+0.3
-0.1
-0.9
-0.9
phage
ICP3_phage_411_MOI_rep2
-0.2
+0.1
+0.3
-0.7
-0.9
phage
ICP1_phage_2.3_MOI_rep2
+0.0
-0.0
+0.4
-0.7
-1.1
lb_aerobic
LB_Aerobic_180MIN_ZN14B
+0.1
+0.1
-0.1
-0.7
-0.9
phage
ICP3_phage_0.41_MOI_rep2
+0.0
+0.7
+0.3
-0.9
-1.4
lb_0.5%bileacids_anaerobic
LB_0.5%bileacids_Anaerobic_120MIN_ZN13B
+0.0
+0.4
-0.0
-0.7
-1.0
phage
ICP3_phage_4.1_MOI_rep2
-0.1
+0.5
+0.4
-0.9
-1.1
phage
ICP3_phage_41.1_MOI_rep1
-0.2
+0.3
+0.3
-0.8
-0.9
lb_0.5%bileacids_anaerobic
LB_0.5%bileacids_Anaerobic_180MIN_ZN17A
+0.2
+0.2
-0.3
-0.9
-0.4
phage
ICP3_phage_411_MOI_rep1
-0.1
+0.7
+0.2
-0.8
-1.1
phage
ICP1_phage_0.23_MOI_rep1
+0.0
+0.2
+0.3
-0.6
-0.9
phage
ICP1_phage_235.3_MOI_rep2
+0.2
+0.8
+0.2
-1.2
-1.0
lb_anaerobic
LB_Anaerobic_60MIN_ZN4B
+0.2
-0.6
-0.8
+0.2
+0.3
phage
ICP1_phage_23.5_MOI_rep1
-0.0
+0.2
+0.6
-0.6
-0.8
phage
ICP3_phage_4.1_MOI_rep1
+0.0
+0.8
+0.6
-0.6
-1.2
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