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Protein
Homologs
Fitness for 5 genes in
Vibrio cholerae E7946 ATCC 55056
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
CSW01_08530 and CSW01_08535 are separated by 13 nucleotides
CSW01_08535 and CSW01_08540 are separated by 103 nucleotides
CSW01_08540 and CSW01_08545 overlap by 8 nucleotides
CSW01_08545 and CSW01_08550 are separated by 132 nucleotides
CSW01_08530: CSW01_08530 - RNA helicase, at 1,829,042 to 1,829,212
_08530
CSW01_08535: CSW01_08535 - TIGR02647 family protein, at 1,829,226 to 1,829,459
_08535
CSW01_08540: CSW01_08540 - NAD(P)-dependent oxidoreductase, at 1,829,563 to 1,830,393
_08540
CSW01_08545: CSW01_08545 - YdcF family protein, at 1,830,386 to 1,831,033
_08545
CSW01_08550: CSW01_08550 - hypothetical protein, at 1,831,166 to 1,831,435
_08550
Group
Condition
CSW01
_08530
CSW01
_08535
CSW01
_08540
CSW01
_08545
CSW01
_08550
lb_0.5%bileacids_anaerobic
LB_0.5%bileacids_Anaerobic_60MIN_ZN5B
+0.0
+0.0
-0.7
-0.4
-0.4
phage
ICP3_phage_4.1_MOI_rep1
+0.2
-1.4
-0.1
-0.0
+0.4
lb_0.5%bileacids_anaerobic
LB_0.5%bileacids_Anaerobic_120MIN_ZN13B
-0.2
-0.1
-0.1
-0.3
-0.3
phage
ICP3_phage_0.41_MOI_rep2
+0.1
-0.6
-0.1
+0.1
-0.2
lb_aerobic
LB_Aerobic_180MIN_ZN14B
+0.0
-0.4
+0.0
-0.4
-0.1
lb_0.5%bileacids_anaerobic
LB_0.5%bileacids_Anaerobic_180MIN_ZN17B
+0.1
-0.0
-0.2
-0.4
-0.1
phage
ICP1_phage_2.3_MOI_rep1
+0.2
-0.5
+0.1
-0.4
+0.1
lb_anaerobic
LB_Anaerobic_180MIN_ZN16B
-0.1
-0.2
-0.1
+0.3
-0.5
lb_aerobic
LB_Aerobic_18HR_ZN18A
-0.6
+0.3
-0.0
-0.1
-0.1
lb_aerobic
LB_Aerobic_120MIN_ZN10B
+0.1
-0.2
-0.4
+0.1
-0.1
lb_aerobic
LB_Aerobic_60MIN_ZN2B
-0.1
-0.3
-0.2
+0.4
-0.3
lb_0.5%bileacids_aerobic
LB_0.5%bileacids_aerobic_180MIN_ZN15B
-0.3
-0.1
+0.2
+0.2
-0.4
lb_0.5%bileacids_anaerobic
LB_0.5%bileacids_Anaerobic_120MIN_ZN13A
-0.2
+0.4
-0.1
-0.1
-0.4
lb_anaerobic
LB_Anaerobic_180MIN_ZN16A
-0.2
-0.3
+0.2
+0.1
-0.2
lb_0.5%bileacids_aerobic
LB_0.5%bileacids_aerobic_18HR_ZN19A
-0.2
-0.0
+0.0
+0.2
-0.3
lb_anaerobic
LB_Anaerobic_60MIN_ZN4B
-0.0
+0.4
-0.1
-0.2
-0.3
lb_0.5%bileacids_aerobic
LB_0.5%bileacids_aerobic_120MIN_ZN11A
-0.0
-0.3
+0.1
+0.2
-0.1
phage
ICP3_phage_41.1_MOI_rep2
-0.1
-0.7
+0.2
+0.2
+0.2
phage
ICP1_phage_235.3_MOI_rep1
-0.1
-1.0
+0.6
+0.3
+0.1
phage
ICP1_phage_0.23_MOI_rep2
+0.3
-0.1
+0.2
-0.1
-0.3
phage
ICP3_phage_0.41_MOI_rep1
+0.6
-0.7
+0.1
-0.1
+0.1
phage
ICP3_phage_41.1_MOI_rep1
+0.6
-0.3
+0.1
+0.0
-0.4
phage
ICP3_phage_411_MOI_rep1
+0.4
-0.2
+0.1
-0.5
+0.3
phage
ICP1_phage_2.3_MOI_rep2
+0.2
+0.2
+0.5
-0.4
-0.2
phage
ICP1_phage_23.5_MOI_rep1
+0.5
-0.1
-0.1
-0.1
+0.2
phage
ICP1_phage_235.3_MOI_rep2
+0.2
-0.2
+0.1
+0.1
+0.2
phage
ICP1_phage_0.23_MOI_rep1
-0.0
+0.1
-0.2
+0.2
+0.4
phage
ICP3_phage_411_MOI_rep2
+0.4
+0.0
+0.0
+0.3
-0.0
phage
ICP1_phage_23.5_MOI_rep2
-0.1
+0.0
+0.3
+0.6
-0.0
phage
ICP3_phage_4.1_MOI_rep2
-0.1
+0.2
+0.2
+0.6
+0.3
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