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Fitness for 5 genes in
Vibrio cholerae E7946 ATCC 55056
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
CSW01_08505 and CSW01_08510 are separated by 23 nucleotides
CSW01_08510 and CSW01_08515 are separated by 46 nucleotides
CSW01_08515 and CSW01_08520 are separated by 379 nucleotides
CSW01_08520 and CSW01_08525 are separated by 63 nucleotides
CSW01_08505: CSW01_08505 - trimethylamine-N-oxide reductase TorA, at 1,823,453 to 1,825,915
_08505
CSW01_08510: CSW01_08510 - pentaheme c-type cytochrome TorC, at 1,825,939 to 1,827,123
_08510
CSW01_08515: CSW01_08515 - trimethylamine N-oxide reductase system protein TorE, at 1,827,170 to 1,827,352
_08515
CSW01_08520: CSW01_08520 - hypothetical protein, at 1,827,732 to 1,827,968
_08520
CSW01_08525: CSW01_08525 - formate transporter FocA, at 1,828,032 to 1,828,874
_08525
Group
Condition
CSW01
_08505
CSW01
_08510
CSW01
_08515
CSW01
_08520
CSW01
_08525
phage
ICP3_phage_411_MOI_rep1
-0.0
-0.2
+0.7
-2.2
-0.3
lb_0.5%bileacids_anaerobic
LB_0.5%bileacids_Anaerobic_60MIN_ZN5B
-0.2
+0.0
-1.0
-0.3
-0.1
phage
ICP3_phage_0.41_MOI_rep1
-0.1
-0.2
-0.6
-0.4
-0.0
phage
ICP1_phage_235.3_MOI_rep2
+0.1
+0.2
+0.2
-1.9
+0.2
phage
ICP1_phage_2.3_MOI_rep1
-0.2
+0.1
-1.0
-0.0
+0.2
lb_0.5%bileacids_anaerobic
LB_0.5%bileacids_Anaerobic_180MIN_ZN17A
-0.1
+0.1
-0.6
-0.0
-0.1
lb_aerobic
LB_Aerobic_18HR_ZN18A
-0.2
+0.2
-0.6
+0.1
-0.1
lb_0.5%bileacids_aerobic
LB_0.5%bileacids_aerobic_180MIN_ZN15B
-0.2
+0.1
+0.1
-0.4
+0.0
lb_0.5%bileacids_aerobic
LB_0.5%bileacids_aerobic_120MIN_ZN11B
-0.1
+0.1
-0.4
+0.4
-0.3
phage
ICP3_phage_41.1_MOI_rep1
-0.3
-0.1
-0.3
+0.5
-0.0
phage
ICP1_phage_0.23_MOI_rep2
-0.2
-0.1
-0.3
-0.1
+0.4
phage
NoPhageControl
-0.0
-0.0
-0.6
+0.4
+0.0
lb_0.5%bileacids_aerobic
LB_0.5%bileacids_aerobic_120MIN_ZN11A
-0.1
+0.1
-0.5
+0.3
+0.1
lb_anaerobic
LB_Anaerobic_60MIN_ZN4B
-0.0
+0.1
-0.9
+0.8
-0.1
phage
ICP3_phage_4.1_MOI_rep1
-0.4
+0.0
+0.1
+0.4
-0.1
phage
ICP1_phage_0.23_MOI_rep1
-0.3
+0.1
+0.4
-0.3
+0.1
lb_anaerobic
LB_Anaerobic_120MIN_ZN12A
-0.1
+0.0
-0.4
+0.6
-0.0
phage
ICP1_phage_235.3_MOI_rep1
-0.2
+0.0
+0.6
-0.7
+0.4
lb_anaerobic
LB_Anaerobic_18HR_ZN20B
-0.1
+0.2
-0.3
+0.4
-0.0
lb_anaerobic
LB_Anaerobic_180MIN_ZN16A
-0.1
+0.2
-0.3
+0.4
-0.0
phage
ICP3_phage_4.1_MOI_rep2
-0.2
+0.3
-0.3
+0.2
+0.3
phage
ICP3_phage_0.41_MOI_rep2
-0.3
+0.1
+0.4
-0.3
+0.3
lb_0.5%bileacids_anaerobic
LB_0.5%bileacids_Anaerobic_120MIN_ZN13B
-0.1
+0.0
-0.5
+0.9
+0.1
lb_anaerobic
LB_Anaerobic_120MIN_ZN12B
-0.2
-0.0
-0.2
+0.9
+0.0
phage
ICP1_phage_23.5_MOI_rep1
-0.0
+0.2
-0.1
+0.4
+0.1
lb_aerobic
LB_Aerobic_180MIN_ZN14B
-0.1
+0.1
-0.1
+0.8
-0.0
lb_0.5%bileacids_aerobic
LB_0.5%bileacids_aerobic_180MIN_ZN15A
-0.1
+0.1
-0.0
+0.6
+0.0
lb_aerobic
LB_Aerobic_18HR_ZN18B
-0.0
+0.1
-0.0
+0.5
+0.2
phage
ICP1_phage_2.3_MOI_rep2
-0.1
-0.2
+0.4
+0.4
+0.3
phage
ICP3_phage_41.1_MOI_rep2
-0.0
+0.1
+0.5
-0.1
+0.6
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