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Fitness for 5 genes in
Vibrio cholerae E7946 ATCC 55056
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
CSW01_08460 and CSW01_08465 overlap by 4 nucleotides
CSW01_08465 and CSW01_08470 are separated by 0 nucleotides
CSW01_08470 and CSW01_08475 are separated by 36 nucleotides
CSW01_08475 and CSW01_08480 are separated by 134 nucleotides
CSW01_08460: CSW01_08460 - ABC transporter ATP-binding protein, at 1,816,035 to 1,817,030
_08460
CSW01_08465: CSW01_08465 - ABC transporter ATP-binding protein, at 1,817,027 to 1,817,815
_08465
CSW01_08470: CSW01_08470 - DUF2927 domain-containing protein, at 1,817,816 to 1,818,586
_08470
CSW01_08475: CSW01_08475 - DUF2750 domain-containing protein, at 1,818,623 to 1,819,012
_08475
CSW01_08480: CSW01_08480 - manganese-dependent inorganic pyrophosphatase, at 1,819,147 to 1,820,052
_08480
Group
Condition
CSW01
_08460
CSW01
_08465
CSW01
_08470
CSW01
_08475
CSW01
_08480
lb_0.5%bileacids_aerobic
LB_0.5%bileacids_aerobic_18HR_ZN19B
N.D.
-1.2
+0.1
-0.2
+0.2
phage
NoPhageControl
N.D.
-0.8
-0.2
+0.0
-0.0
lb_0.5%bileacids_anaerobic
LB_0.5%bileacids_Anaerobic_18HR_ZN21A
N.D.
-1.1
+0.1
-0.1
+0.3
lb_0.5%bileacids_aerobic
LB_0.5%bileacids_aerobic_18HR_ZN19A
N.D.
-1.3
+0.3
+0.0
+0.3
lb_0.5%bileacids_aerobic
LB_0.5%bileacids_aerobic_180MIN_ZN15B
N.D.
-0.7
+0.1
-0.2
+0.2
phage
NoPhageControl
N.D.
-0.6
-0.2
+0.3
-0.0
lb_anaerobic
LB_Anaerobic_18HR_ZN20A
N.D.
-0.8
+0.3
+0.1
+0.3
lb_0.5%bileacids_aerobic
LB_0.5%bileacids_aerobic_120MIN_ZN11B
N.D.
-0.5
+0.4
-0.1
+0.3
lb_aerobic
LB_Aerobic_18HR_ZN18A
N.D.
+0.4
+0.1
-0.2
+0.3
lb_0.5%bileacids_anaerobic
LB_0.5%bileacids_Anaerobic_60MIN_ZN5B
N.D.
+0.3
+0.2
-0.3
+0.5
lb_anaerobic
LB_Anaerobic_18HR_ZN20B
N.D.
+0.4
+0.3
-0.1
+0.3
lb_anaerobic
LB_Anaerobic_60MIN_ZN4B
N.D.
+0.7
+0.1
-0.0
+0.2
lb_0.5%bileacids_anaerobic
LB_0.5%bileacids_Anaerobic_120MIN_ZN13A
N.D.
+0.6
+0.2
+0.1
+0.2
phage
ICP3_phage_4.1_MOI_rep2
N.D.
+2.2
-0.3
-0.4
-0.4
lb_0.5%bileacids_anaerobic
LB_0.5%bileacids_Anaerobic_180MIN_ZN17B
N.D.
+1.0
+0.2
-0.1
+0.3
phage
ICP1_phage_23.5_MOI_rep1
N.D.
+2.2
+0.2
-0.4
-0.4
phage
ICP1_phage_2.3_MOI_rep2
N.D.
+2.5
-0.4
-0.0
-0.3
phage
ICP1_phage_235.3_MOI_rep2
N.D.
+2.2
-0.3
-0.0
-0.1
phage
ICP3_phage_411_MOI_rep1
N.D.
+2.5
-0.3
-0.2
+0.0
phage
ICP1_phage_0.23_MOI_rep2
N.D.
+2.7
-0.3
+0.1
-0.3
phage
ICP3_phage_0.41_MOI_rep1
N.D.
+2.3
+0.1
+0.2
-0.2
phage
ICP1_phage_23.5_MOI_rep2
N.D.
+2.3
-0.0
+0.3
-0.2
phage
ICP3_phage_0.41_MOI_rep2
N.D.
+2.4
+0.2
+0.2
-0.4
phage
ICP3_phage_411_MOI_rep2
N.D.
+2.3
+0.3
+0.2
-0.2
phage
ICP3_phage_4.1_MOI_rep1
N.D.
+2.4
-0.3
+0.3
+0.2
phage
ICP1_phage_0.23_MOI_rep1
N.D.
+3.1
-0.2
+0.1
-0.3
phage
ICP1_phage_235.3_MOI_rep1
N.D.
+2.5
+0.1
-0.0
+0.1
phage
ICP3_phage_41.1_MOI_rep2
N.D.
+2.2
+0.4
+0.2
-0.0
phage
ICP1_phage_2.3_MOI_rep1
N.D.
+2.4
+0.3
+0.3
-0.0
phage
ICP3_phage_41.1_MOI_rep1
N.D.
+2.6
+0.0
+0.6
+0.1
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