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Protein
Homologs
Fitness for 5 genes in
Vibrio cholerae E7946 ATCC 55056
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
CSW01_08435 and CSW01_08440 are separated by 209 nucleotides
CSW01_08440 and CSW01_08445 are separated by 113 nucleotides
CSW01_08445 and CSW01_08450 overlap by 1 nucleotides
CSW01_08450 and CSW01_08455 overlap by 14 nucleotides
CSW01_08435: CSW01_08435 - phage shock protein PspA, at 1,810,569 to 1,811,237
_08435
CSW01_08440: CSW01_08440 - phage shock protein operon transcriptional activator, at 1,811,447 to 1,812,463
_08440
CSW01_08445: CSW01_08445 - ABC transporter substrate-binding protein, at 1,812,577 to 1,814,199
_08445
CSW01_08450: CSW01_08450 - antimicrobial peptide ABC transporter permease SapB, at 1,814,199 to 1,815,161
_08450
CSW01_08455: CSW01_08455 - peptide ABC transporter permease SapC, at 1,815,148 to 1,816,035
_08455
Group
Condition
CSW01
_08435
CSW01
_08440
CSW01
_08445
CSW01
_08450
CSW01
_08455
lb_0.5%bileacids_aerobic
LB_0.5%bileacids_aerobic_18HR_ZN19B
-0.4
-0.0
-0.5
-2.8
N.D.
lb_0.5%bileacids_anaerobic
LB_0.5%bileacids_Anaerobic_60MIN_ZN5B
-0.4
-0.1
-0.5
-2.0
N.D.
lb_anaerobic
LB_Anaerobic_120MIN_ZN12A
-0.5
+0.1
-0.1
-2.2
N.D.
lb_0.5%bileacids_aerobic
LB_0.5%bileacids_aerobic_180MIN_ZN15A
-0.5
+0.1
-0.2
-2.0
N.D.
lb_anaerobic
LB_Anaerobic_120MIN_ZN12B
-0.4
+0.0
-0.2
-2.0
N.D.
lb_anaerobic
LB_Anaerobic_18HR_ZN20A
-0.3
+0.3
-0.4
-2.0
N.D.
phage
NoPhageControl
-0.3
+0.2
-0.5
-1.7
N.D.
phage
NoPhageControl
-0.2
+0.2
-0.6
-1.7
N.D.
lb_0.5%bileacids_anaerobic
LB_0.5%bileacids_Anaerobic_18HR_ZN21A
-0.6
+0.2
-0.3
-1.6
N.D.
lb_aerobic
LB_Aerobic_120MIN_ZN10B
-0.7
+0.1
-0.3
-1.3
N.D.
lb_0.5%bileacids_anaerobic
LB_0.5%bileacids_Anaerobic_60MIN_ZN5A
-0.4
+0.1
+0.0
-1.8
N.D.
lb_aerobic
LB_Aerobic_180MIN_ZN14A
-1.0
+0.2
-0.1
-1.1
N.D.
lb_aerobic
LB_Aerobic_60MIN_ZN2B
-0.4
+0.1
+0.4
-1.5
N.D.
lb_0.5%bileacids_aerobic
LB_0.5%bileacids_aerobic_120MIN_ZN11B
-0.5
+0.2
-0.0
-1.1
N.D.
phage
ICP1_phage_0.23_MOI_rep2
-0.6
+0.5
+1.7
+1.5
N.D.
phage
ICP3_phage_4.1_MOI_rep1
-0.2
-0.1
+1.8
+1.6
N.D.
phage
ICP3_phage_0.41_MOI_rep2
-0.6
+0.4
+1.7
+1.7
N.D.
phage
ICP3_phage_0.41_MOI_rep1
-0.1
-0.1
+1.8
+1.6
N.D.
phage
ICP1_phage_2.3_MOI_rep1
-0.0
-0.1
+1.7
+1.8
N.D.
phage
ICP3_phage_41.1_MOI_rep1
+0.1
-0.0
+1.8
+1.6
N.D.
phage
ICP3_phage_4.1_MOI_rep2
-0.4
+0.4
+1.8
+1.8
N.D.
phage
ICP3_phage_41.1_MOI_rep2
-0.5
+0.2
+1.9
+2.0
N.D.
phage
ICP1_phage_23.5_MOI_rep1
-0.3
+0.0
+1.9
+1.9
N.D.
phage
ICP3_phage_411_MOI_rep1
-0.2
+0.0
+2.1
+1.9
N.D.
phage
ICP1_phage_235.3_MOI_rep2
+0.3
+0.2
+1.9
+1.4
N.D.
phage
ICP1_phage_23.5_MOI_rep2
-0.2
+0.3
+2.0
+1.9
N.D.
phage
ICP1_phage_2.3_MOI_rep2
+0.3
-0.0
+1.8
+1.9
N.D.
phage
ICP3_phage_411_MOI_rep2
+0.1
+0.2
+1.9
+1.8
N.D.
phage
ICP1_phage_235.3_MOI_rep1
+0.4
-0.0
+1.9
+1.8
N.D.
phage
ICP1_phage_0.23_MOI_rep1
+0.4
+0.4
+2.1
+1.9
N.D.
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