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Protein
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Fitness for 5 genes in
Vibrio cholerae E7946 ATCC 55056
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
CSW01_08340 and CSW01_08345 are separated by 158 nucleotides
CSW01_08345 and CSW01_08350 are separated by 5 nucleotides
CSW01_08350 and CSW01_08355 are separated by 146 nucleotides
CSW01_08355 and CSW01_08360 are separated by 207 nucleotides
CSW01_08340: CSW01_08340 - ABC transporter permease, at 1,791,668 to 1,792,765
_08340
CSW01_08345: CSW01_08345 - hypothetical protein, at 1,792,924 to 1,793,145
_08345
CSW01_08350: CSW01_08350 - DUF1289 domain-containing protein, at 1,793,151 to 1,793,417
_08350
CSW01_08355: CSW01_08355 - heat-shock protein HslJ, at 1,793,564 to 1,794,007
_08355
CSW01_08360: CSW01_08360 - ABC transporter substrate-binding protein, at 1,794,215 to 1,795,363
_08360
Group
Condition
CSW01
_08340
CSW01
_08345
CSW01
_08350
CSW01
_08355
CSW01
_08360
phage
ICP1_phage_0.23_MOI_rep1
-0.2
-1.2
-0.3
-1.9
+0.0
phage
ICP3_phage_411_MOI_rep1
-0.3
-0.7
-0.5
-0.6
-0.5
phage
ICP3_phage_0.41_MOI_rep2
-0.1
-0.3
-0.4
-0.9
-0.1
phage
ICP3_phage_411_MOI_rep2
+0.1
+0.0
-1.8
+0.0
+0.1
phage
ICP3_phage_41.1_MOI_rep1
-0.1
+0.2
-0.9
-1.0
+0.2
lb_aerobic
LB_Aerobic_180MIN_ZN14A
-0.1
-1.1
-0.3
-0.1
+0.1
phage
ICP3_phage_4.1_MOI_rep2
+0.1
+0.7
-0.9
-1.3
+0.0
phage
ICP1_phage_23.5_MOI_rep1
+0.1
-0.7
-0.5
-0.2
-0.1
phage
ICP1_phage_0.23_MOI_rep2
-0.4
-0.3
+0.0
-0.4
-0.1
lb_0.5%bileacids_aerobic
LB_0.5%bileacids_aerobic_18HR_ZN19B
+0.0
-0.5
-0.2
-0.3
-0.2
lb_0.5%bileacids_aerobic
LB_0.5%bileacids_aerobic_18HR_ZN19A
-0.1
-0.6
+0.0
-0.4
+0.0
lb_0.5%bileacids_anaerobic
LB_0.5%bileacids_Anaerobic_180MIN_ZN17A
-0.2
-0.5
-0.2
+0.0
-0.1
lb_0.5%bileacids_aerobic
LB_0.5%bileacids_aerobic_180MIN_ZN15B
+0.1
-0.4
-0.6
-0.0
+0.1
lb_0.5%bileacids_aerobic
LB_0.5%bileacids_aerobic_120MIN_ZN11B
+0.1
-0.2
-0.2
-0.2
-0.2
phage
ICP1_phage_235.3_MOI_rep1
+0.2
-0.1
+0.1
-0.6
-0.4
phage
ICP1_phage_2.3_MOI_rep2
+0.1
-0.5
-0.9
+0.5
+0.2
phage
ICP3_phage_41.1_MOI_rep2
+0.1
-0.1
+0.1
-0.3
-0.3
lb_aerobic_phage
LB_Aerobic_PHAGE INFX20MPI_ZN6A
+0.0
-0.8
+0.1
+0.1
+0.0
lb_anaerobic
LB_Anaerobic_60MIN_ZN4B
+0.2
-0.6
-0.1
+0.1
-0.1
lb_anaerobic
LB_Anaerobic_180MIN_ZN16B
-0.0
-0.9
+0.0
+0.4
-0.0
lb_aerobic
LB_Aerobic_120MIN_ZN10B
-0.2
-0.3
-0.0
+0.2
-0.1
phage
ICP3_phage_4.1_MOI_rep1
+0.1
+0.5
-0.2
-0.7
+0.0
phage
ICP1_phage_235.3_MOI_rep2
-0.1
+0.3
-0.7
+0.1
+0.2
phage
ICP1_phage_2.3_MOI_rep1
+0.0
+0.2
-0.5
-0.3
+0.5
phage
ICP3_phage_0.41_MOI_rep1
+0.3
-0.2
-0.0
+0.2
-0.2
lb_0.5%bileacids_anaerobic
LB_0.5%bileacids_Anaerobic_60MIN_ZN5A
-0.1
+0.2
+0.1
+0.8
-0.7
lb_0.5%bileacids_anaerobic
LB_0.5%bileacids_Anaerobic_180MIN_ZN17B
+0.1
-0.6
+0.2
+0.4
+0.2
lb_anaerobic
LB_Anaerobic_180MIN_ZN16A
+0.1
-0.4
+0.2
+0.5
-0.1
lb_0.5%bileacids_anaerobic
LB_0.5%bileacids_Anaerobic_60MIN_ZN5B
-0.1
+0.1
-0.1
+0.5
+0.0
phage
NoPhageControl
+0.1
+0.3
-0.1
+0.3
+0.1
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