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Protein
Homologs
Fitness for 5 genes in
Vibrio cholerae E7946 ATCC 55056
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
CSW01_08240 and CSW01_08245 are separated by 157 nucleotides
CSW01_08245 and CSW01_08250 are separated by 149 nucleotides
CSW01_08250 and CSW01_08255 are separated by 91 nucleotides
CSW01_08255 and CSW01_08260 overlap by 25 nucleotides
CSW01_08240: CSW01_08240 - ATP-binding protein, at 1,763,671 to 1,765,059
_08240
CSW01_08245: CSW01_08245 - 50S ribosomal protein L25, at 1,765,217 to 1,765,495
_08245
CSW01_08250: CSW01_08250 - EAL domain-containing protein, at 1,765,645 to 1,766,418
_08250
CSW01_08255: CSW01_08255 - ribosome recycling factor, at 1,766,510 to 1,766,911
_08255
CSW01_08260: CSW01_08260 - hypothetical protein, at 1,766,887 to 1,767,081
_08260
Group
Condition
CSW01
_08240
CSW01
_08245
CSW01
_08250
CSW01
_08255
CSW01
_08260
phage
NoPhageControl
-1.8
N.D.
-0.1
-0.1
+0.1
lb_0.5%bileacids_anaerobic
LB_0.5%bileacids_Anaerobic_18HR_ZN21A
-1.9
N.D.
+0.0
+0.1
+0.1
lb_anaerobic
LB_Anaerobic_18HR_ZN20B
-1.8
N.D.
+0.1
-0.1
+0.1
lb_anaerobic
LB_Anaerobic_18HR_ZN20A
-1.6
N.D.
+0.1
-0.3
+0.1
phage
NoPhageControl
-1.4
N.D.
+0.0
-0.1
-0.1
lb_anaerobic
LB_Anaerobic_120MIN_ZN12A
-0.9
N.D.
-0.0
-0.4
-0.2
lb_0.5%bileacids_aerobic
LB_0.5%bileacids_aerobic_120MIN_ZN11B
-0.8
N.D.
+0.0
-0.4
-0.2
lb_0.5%bileacids_aerobic
LB_0.5%bileacids_aerobic_180MIN_ZN15B
-1.0
N.D.
+0.1
-0.2
-0.0
lb_0.5%bileacids_aerobic
LB_0.5%bileacids_aerobic_18HR_ZN19B
-0.9
N.D.
+0.0
-0.1
-0.0
lb_0.5%bileacids_anaerobic
LB_0.5%bileacids_Anaerobic_180MIN_ZN17B
-1.1
N.D.
+0.2
+0.1
-0.2
lb_aerobic
LB_Aerobic_18HR_ZN18A
-0.9
N.D.
+0.2
-0.2
+0.0
lb_aerobic
LB_Aerobic_120MIN_ZN10B
-0.5
N.D.
+0.2
-0.2
-0.2
phage
ICP1_phage_0.23_MOI_rep1
-1.1
N.D.
-0.2
+0.3
+0.3
phage
ICP1_phage_2.3_MOI_rep2
-0.5
N.D.
-0.0
-0.2
+0.3
lb_anaerobic
LB_Anaerobic_180MIN_ZN16A
-0.5
N.D.
+0.2
-0.1
+0.1
lb_aerobic
LB_Aerobic_60MIN_ZN2B
-0.7
N.D.
+0.2
+0.1
+0.2
phage
ICP1_phage_235.3_MOI_rep1
-0.7
N.D.
+0.0
+0.5
+0.1
lb_anaerobic
LB_Anaerobic_180MIN_ZN16B
-0.4
N.D.
+0.2
+0.2
-0.1
phage
ICP3_phage_0.41_MOI_rep2
-0.6
N.D.
-0.1
+0.2
+0.5
lb_aerobic
LB_Aerobic_180MIN_ZN14B
-0.6
N.D.
+0.2
+0.0
+0.4
phage
ICP3_phage_411_MOI_rep2
-0.9
N.D.
-0.1
+0.5
+0.6
phage
ICP3_phage_0.41_MOI_rep1
-0.7
N.D.
-0.0
+0.7
+0.5
phage
ICP1_phage_23.5_MOI_rep2
-0.5
N.D.
-0.1
+0.1
+0.9
phage
ICP3_phage_4.1_MOI_rep2
-0.3
N.D.
-0.1
+0.2
+0.6
phage
ICP1_phage_2.3_MOI_rep1
-0.2
N.D.
-0.1
+0.0
+1.0
phage
ICP3_phage_4.1_MOI_rep1
-0.3
N.D.
-0.1
+0.5
+0.7
phage
ICP3_phage_41.1_MOI_rep1
-0.4
N.D.
+0.0
+0.3
+1.0
phage
ICP1_phage_23.5_MOI_rep1
+0.1
N.D.
-0.2
+0.4
+0.6
phage
ICP1_phage_235.3_MOI_rep2
+0.5
N.D.
-0.1
+0.1
+0.5
phage
ICP3_phage_41.1_MOI_rep2
+0.7
N.D.
+0.0
+0.5
+1.0
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