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Protein
Homologs
Fitness for 5 genes in
Vibrio cholerae E7946 ATCC 55056
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
CSW01_08190 and CSW01_08195 overlap by 77 nucleotides
CSW01_08195 and CSW01_08200 are separated by 125 nucleotides
CSW01_08200 and CSW01_08205 are separated by 127 nucleotides
CSW01_08205 and CSW01_08210 are separated by 66 nucleotides
CSW01_08190: CSW01_08190 - ABC transporter permease, at 1,751,319 to 1,753,829
_08190
CSW01_08195: CSW01_08195 - ABC transporter ATP-binding protein, at 1,753,753 to 1,754,424
_08195
CSW01_08200: CSW01_08200 - MATE family efflux transporter, at 1,754,550 to 1,755,926
_08200
CSW01_08205: CSW01_08205 - DUF2867 domain-containing protein, at 1,756,054 to 1,757,490
_08205
CSW01_08210: CSW01_08210 - DUF2913 domain-containing protein, at 1,757,557 to 1,758,294
_08210
Group
Condition
CSW01
_08190
CSW01
_08195
CSW01
_08200
CSW01
_08205
CSW01
_08210
lb_0.5%bileacids_anaerobic
LB_0.5%bileacids_Anaerobic_180MIN_ZN17B
-0.4
-0.4
+0.1
+0.0
-0.2
lb_aerobic
LB_Aerobic_180MIN_ZN14A
-0.3
-0.7
+0.3
+0.1
-0.2
lb_0.5%bileacids_anaerobic
LB_0.5%bileacids_Anaerobic_120MIN_ZN13A
-0.3
-0.3
+0.1
-0.1
-0.1
lb_aerobic
LB_Aerobic_18HR_ZN18A
-0.5
-0.4
+0.3
+0.1
+0.1
lb_anaerobic
LB_Anaerobic_180MIN_ZN16B
-0.3
-0.3
+0.1
+0.1
-0.0
lb_aerobic
LB_Aerobic_180MIN_ZN14B
-0.2
-0.4
+0.1
+0.1
+0.0
lb_anaerobic
LB_Anaerobic_120MIN_ZN12B
-0.3
-0.2
+0.1
+0.1
-0.0
lb_0.5%bileacids_anaerobic
LB_0.5%bileacids_Anaerobic_120MIN_ZN13B
-0.4
-0.3
+0.2
+0.1
+0.1
lb_aerobic_phage
LB_Aerobic_PHAGE INFX20MPI_ZN6A
-0.1
-0.4
+0.3
+0.2
-0.1
lb_0.5%bileacids_anaerobic
LB_0.5%bileacids_Anaerobic_18HR_ZN21A
-0.1
-0.2
+0.3
+0.1
-0.1
lb_anaerobic
LB_Anaerobic_18HR_ZN20B
-0.2
-0.2
+0.4
-0.0
+0.0
lb_0.5%bileacids_aerobic
LB_0.5%bileacids_aerobic_18HR_ZN19B
-0.1
-0.2
+0.2
+0.2
-0.1
lb_0.5%bileacids_anaerobic
LB_0.5%bileacids_Anaerobic_60MIN_ZN5B
-0.1
-0.5
+0.3
+0.1
+0.3
phage
NoPhageControl
-0.0
+0.5
-0.1
-0.1
-0.0
phage
ICP3_phage_4.1_MOI_rep1
+0.5
+0.4
-0.4
+0.3
-0.1
phage
ICP3_phage_411_MOI_rep2
+0.6
-0.0
-0.1
+0.0
+0.3
phage
ICP3_phage_41.1_MOI_rep1
+0.5
+0.4
-0.2
-0.2
+0.3
phage
ICP1_phage_2.3_MOI_rep2
+0.4
+0.7
-0.2
-0.1
+0.1
phage
ICP1_phage_235.3_MOI_rep1
+0.7
+0.4
-0.1
-0.0
-0.0
phage
ICP1_phage_0.23_MOI_rep2
+0.5
+0.3
+0.0
-0.2
+0.4
phage
ICP3_phage_41.1_MOI_rep2
+0.6
+0.5
-0.1
-0.1
+0.2
phage
ICP1_phage_2.3_MOI_rep1
+0.7
+0.4
-0.3
-0.1
+0.4
phage
ICP1_phage_23.5_MOI_rep2
+0.5
+0.7
-0.1
-0.0
-0.0
phage
ICP1_phage_235.3_MOI_rep2
+0.5
+0.9
-0.4
-0.1
+0.4
phage
ICP3_phage_0.41_MOI_rep2
+0.4
+0.6
-0.1
-0.1
+0.3
phage
ICP3_phage_0.41_MOI_rep1
+0.6
+0.9
-0.1
+0.1
-0.1
phage
ICP3_phage_4.1_MOI_rep2
+0.7
+0.4
+0.2
+0.2
+0.2
phage
ICP1_phage_23.5_MOI_rep1
+0.6
+0.7
+0.2
+0.2
+0.1
phage
ICP1_phage_0.23_MOI_rep1
+0.6
+0.7
+0.1
+0.1
+0.3
phage
ICP3_phage_411_MOI_rep1
+0.7
+0.9
+0.0
+0.1
+0.3
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