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Protein
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Fitness for 5 genes in
Vibrio cholerae E7946 ATCC 55056
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
CSW01_07985 and CSW01_07990 are separated by 82 nucleotides
CSW01_07990 and CSW01_07995 are separated by 17 nucleotides
CSW01_07995 and CSW01_08000 are separated by 29 nucleotides
CSW01_08000 and CSW01_08005 are separated by 8 nucleotides
CSW01_07985: CSW01_07985 - EAL domain-containing protein, at 1,702,436 to 1,703,290
_07985
CSW01_07990: CSW01_07990 - GGDEF domain-containing protein, at 1,703,373 to 1,704,662
_07990
CSW01_07995: CSW01_07995 - galactose-1-epimerase, at 1,704,680 to 1,705,711
_07995
CSW01_08000: CSW01_08000 - galactokinase, at 1,705,741 to 1,706,958
_08000
CSW01_08005: CSW01_08005 - UDP-glucose--hexose-1-phosphate uridylyltransferase, at 1,706,967 to 1,708,031
_08005
Group
Condition
CSW01
_07985
CSW01
_07990
CSW01
_07995
CSW01
_08000
CSW01
_08005
lb_0.5%bileacids_anaerobic
LB_0.5%bileacids_Anaerobic_180MIN_ZN17B
+0.1
+0.1
-0.2
-0.2
-0.3
phage
ICP1_phage_0.23_MOI_rep2
-0.3
-0.3
+0.0
+0.1
+0.2
phage
ICP1_phage_235.3_MOI_rep2
-0.5
-0.0
+0.2
+0.0
-0.0
phage
ICP3_phage_411_MOI_rep2
-0.6
-0.2
+0.4
+0.1
+0.0
phage
ICP3_phage_4.1_MOI_rep1
-0.5
-0.2
+0.1
+0.2
+0.3
lb_0.5%bileacids_aerobic
LB_0.5%bileacids_aerobic_180MIN_ZN15A
-0.2
-0.1
+0.0
-0.1
+0.2
lb_anaerobic
LB_Anaerobic_180MIN_ZN16A
-0.0
-0.0
-0.1
-0.3
+0.3
lb_anaerobic
LB_Anaerobic_120MIN_ZN12B
+0.2
-0.0
-0.3
+0.1
-0.2
phage
NoPhageControl
+0.2
+0.0
-0.3
-0.1
-0.0
phage
ICP1_phage_23.5_MOI_rep1
-0.3
-0.1
+0.3
-0.1
+0.1
lb_aerobic
LB_Aerobic_60MIN_ZN2B
+0.0
+0.1
+0.1
-0.5
+0.2
phage
ICP1_phage_0.23_MOI_rep1
-0.2
+0.1
-0.1
+0.6
-0.4
phage
ICP1_phage_23.5_MOI_rep2
-0.3
-0.0
+0.1
+0.6
-0.4
phage
ICP1_phage_2.3_MOI_rep1
-0.0
-0.2
-0.2
+0.1
+0.3
lb_anaerobic
LB_Anaerobic_60MIN_ZN4B
-0.1
-0.1
+0.0
+0.1
+0.2
phage
ICP3_phage_41.1_MOI_rep1
-0.3
-0.1
+0.1
+0.2
+0.1
lb_aerobic
LB_Aerobic_18HR_ZN18B
+0.2
-0.0
+0.1
-0.2
+0.0
phage
ICP3_phage_0.41_MOI_rep1
-0.5
-0.2
+0.0
+0.8
-0.0
phage
ICP1_phage_2.3_MOI_rep2
-0.3
-0.0
+0.4
+0.3
-0.3
lb_aerobic
LB_Aerobic_18HR_ZN18A
+0.1
+0.1
-0.0
-0.1
+0.2
lb_0.5%bileacids_anaerobic
LB_0.5%bileacids_Anaerobic_60MIN_ZN5B
+0.3
-0.0
+0.2
-0.1
-0.1
phage
ICP3_phage_41.1_MOI_rep2
-0.3
-0.1
+0.2
+0.2
+0.3
lb_0.5%bileacids_anaerobic
LB_0.5%bileacids_Anaerobic_180MIN_ZN17A
+0.2
+0.0
+0.0
-0.1
+0.3
phage
ICP3_phage_4.1_MOI_rep2
-0.2
+0.2
-0.0
+0.4
+0.1
lb_anaerobic
LB_Anaerobic_180MIN_ZN16B
+0.0
+0.1
+0.1
+0.1
+0.4
lb_anaerobic
LB_Anaerobic_18HR_ZN20B
+0.2
+0.0
+0.0
+0.2
+0.1
lb_0.5%bileacids_anaerobic
LB_0.5%bileacids_Anaerobic_60MIN_ZN5A
+0.4
-0.0
+0.1
-0.2
+0.4
lb_0.5%bileacids_anaerobic
LB_0.5%bileacids_Anaerobic_120MIN_ZN13B
+0.5
+0.0
+0.0
-0.3
+0.4
phage
ICP1_phage_235.3_MOI_rep1
-0.1
+0.1
+0.1
+0.6
+0.3
phage
ICP3_phage_411_MOI_rep1
+0.2
-0.0
+0.2
+0.6
+0.1
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