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Protein
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Fitness for 5 genes in
Vibrio cholerae E7946 ATCC 55056
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
CSW01_07780 and CSW01_07785 are separated by 318 nucleotides
CSW01_07785 and CSW01_07790 are separated by 75 nucleotides
CSW01_07790 and CSW01_07795 are separated by 9 nucleotides
CSW01_07795 and CSW01_07800 overlap by 11 nucleotides
CSW01_07780: CSW01_07780 - DUF3450 domain-containing protein, at 1,658,933 to 1,659,691
_07780
CSW01_07785: CSW01_07785 - ABC transporter substrate-binding protein, at 1,660,010 to 1,661,314
_07785
CSW01_07790: CSW01_07790 - glycerol-3-phosphate transporter permease, at 1,661,390 to 1,662,271
_07790
CSW01_07795: CSW01_07795 - sn-glycerol-3-phosphate ABC transporter permease UgpE, at 1,662,281 to 1,663,123
_07795
CSW01_07800: CSW01_07800 - sn-glycerol-3-phosphate import ATP-binding protein UgpC, at 1,663,113 to 1,664,294
_07800
Group
Condition
CSW01
_07780
CSW01
_07785
CSW01
_07790
CSW01
_07795
CSW01
_07800
phage
ICP1_phage_23.5_MOI_rep1
-0.3
+0.0
-0.3
-0.5
+0.2
phage
ICP1_phage_0.23_MOI_rep1
-0.6
-0.1
-0.2
-0.1
+0.1
lb_0.5%bileacids_aerobic
LB_0.5%bileacids_aerobic_18HR_ZN19B
-0.9
-0.1
-0.1
+0.2
+0.1
phage
ICP1_phage_23.5_MOI_rep2
-0.4
-0.1
+0.1
-0.4
-0.0
lb_0.5%bileacids_aerobic
LB_0.5%bileacids_aerobic_120MIN_ZN11B
-0.5
-0.1
-0.1
-0.2
+0.2
phage
ICP3_phage_4.1_MOI_rep1
-0.1
-0.3
+0.2
-0.3
-0.2
phage
ICP1_phage_235.3_MOI_rep1
-0.2
-0.6
+0.2
+0.2
-0.2
phage
ICP3_phage_0.41_MOI_rep2
-0.4
+0.1
-0.2
-0.1
+0.1
lb_anaerobic
LB_Anaerobic_18HR_ZN20B
-0.2
-0.1
-0.2
+0.1
+0.1
phage
ICP3_phage_0.41_MOI_rep1
-0.2
-0.2
+0.3
-0.4
+0.1
phage
ICP3_phage_411_MOI_rep2
-0.1
-0.5
-0.3
+0.1
+0.4
phage
ICP3_phage_4.1_MOI_rep2
-0.1
-0.4
+0.1
+0.2
+0.0
lb_anaerobic
LB_Anaerobic_18HR_ZN20A
-0.4
-0.0
+0.0
-0.1
+0.3
lb_anaerobic
LB_Anaerobic_180MIN_ZN16A
-0.3
+0.0
+0.1
-0.2
+0.2
lb_anaerobic
LB_Anaerobic_120MIN_ZN12B
-0.0
-0.2
-0.2
-0.1
+0.2
lb_0.5%bileacids_aerobic
LB_0.5%bileacids_aerobic_180MIN_ZN15A
-0.2
-0.1
-0.1
-0.1
+0.3
phage
ICP3_phage_41.1_MOI_rep1
-0.4
-0.2
+0.0
+0.3
+0.2
lb_anaerobic
LB_Anaerobic_120MIN_ZN12A
-0.0
-0.1
-0.3
+0.1
+0.3
lb_0.5%bileacids_anaerobic
LB_0.5%bileacids_Anaerobic_180MIN_ZN17A
+0.2
-0.1
-0.3
-0.1
+0.2
lb_0.5%bileacids_anaerobic
LB_0.5%bileacids_Anaerobic_60MIN_ZN5B
-0.2
-0.0
+0.0
-0.2
+0.3
lb_aerobic
LB_Aerobic_120MIN_ZN10B
-0.3
-0.2
+0.0
+0.2
+0.3
lb_aerobic
LB_Aerobic_180MIN_ZN14B
-0.2
+0.1
-0.1
-0.0
+0.3
phage
ICP1_phage_235.3_MOI_rep2
-0.1
-0.2
+0.3
-0.1
+0.1
phage
ICP1_phage_0.23_MOI_rep2
-0.0
-0.2
+0.3
+0.3
-0.2
lb_0.5%bileacids_anaerobic
LB_0.5%bileacids_Anaerobic_180MIN_ZN17B
+0.2
-0.2
-0.3
+0.1
+0.3
lb_aerobic_phage
LB_Aerobic_PHAGE INFX20MPI_ZN6A
+0.1
-0.0
-0.0
-0.2
+0.3
phage
ICP1_phage_2.3_MOI_rep1
-0.5
-0.1
+0.3
+0.2
+0.4
lb_aerobic
LB_Aerobic_60MIN_ZN2B
-0.1
-0.0
-0.2
+0.4
+0.2
lb_anaerobic
LB_Anaerobic_60MIN_ZN4B
-0.1
+0.1
+0.3
+0.1
+0.3
phage
ICP3_phage_41.1_MOI_rep2
+0.2
-0.1
+0.4
+0.2
+0.1
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